RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 OR2L13Q8N349 312 aa16.94■□□□□ 0.3
LMNA-207ENST00000368301 S100ZQ8WXG8 99 aa16.94■□□□□ 0.3
LMNA-207ENST00000368301 GDF15Q99988 308 aa16.94■□□□□ 0.3
LMNA-207ENST00000368301 C8orf33Q9H7E9 229 aaPredicted RBP16.94■□□□□ 0.3
LMNA-207ENST00000368301 HRASLS2Q9NWW9 162 aa16.94■□□□□ 0.3
LMNA-207ENST00000368301 SLC13A4Q9UKG4 626 aa16.94■□□□□ 0.3
LMNA-207ENST00000368301 NDRG2Q9UN36 371 aaKnown RBP16.94■□□□□ 0.3
LMNA-207ENST00000368301 FAM170BA6NMN3 283 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 FGF17O60258 216 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 CSO75390 466 aaKnown RBP16.93■□□□□ 0.3
LMNA-207ENST00000368301 CPMP14384 443 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 ALOX12P18054 663 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 UBE2IP63279 158 aaKnown RBP16.93■□□□□ 0.3
LMNA-207ENST00000368301 CDK5Q00535 292 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 COX10Q12887 443 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 ZNF404Q494X3 552 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 TYW3Q6IPR3 259 aaKnown RBP16.93■□□□□ 0.3
LMNA-207ENST00000368301 ABI3BPQ7Z7G0 1075 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 GPBAR1Q8TDU6 330 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 FGF11Q92914 225 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 TMEM80Q96HE8 168 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 CDADC1Q9BWV3 514 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 HHATLQ9HCP6 504 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 NTMQ9P121 344 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 DOLKQ9UPQ8 538 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 GPR52Q9Y2T5 361 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 SPEGQ15772 3267 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 VCANP13611 3396 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 TNFP01375 233 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 CSTF2P33240 577 aaKnown RBP eCLIP16.93■□□□□ 0.3
LMNA-207ENST00000368301 PUS10Q3MIT2 529 aaKnown RBP16.93■□□□□ 0.3
LMNA-207ENST00000368301 C19orf48Q6RUI8 117 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 LINC00299Q6ZSB3 139 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 CYP4Z2PQ8N1L4 340 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 CAMKVQ8NCB2 501 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 BAHD1Q8TBE0 780 aaPredicted RBP16.93■□□□□ 0.3
LMNA-207ENST00000368301 ARSGQ96EG1 525 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 LRR1Q96L50 414 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 TAPBPLQ9BX59 468 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 C6orf62Q9GZU0 229 aaPredicted RBP16.93■□□□□ 0.3
LMNA-207ENST00000368301 ADAP2Q9NPF8 381 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 FBXO34Q9NWN3 711 aa16.93■□□□□ 0.3
LMNA-207ENST00000368301 ZNF443Q9Y2A4 671 aaPredicted RBP16.93■□□□□ 0.3
LMNA-207ENST00000368301 WWP2O00308 870 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 PIP5K1CO60331 668 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 GPX5O75715 221 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 CCNYL3P0C7X3 344 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 TYRP1P17643 537 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 RGS8P57771 180 aaPredicted RBP16.92■□□□□ 0.3
LMNA-207ENST00000368301 TUBA1BP68363 451 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 SHC2P98077 582 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 ZNF628Q5EBL2 1059 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 CLEC12AQ5QGZ9 265 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 ZNF730Q6ZMV8 503 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 TUBA1AQ71U36 451 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 ABHD13Q7L211 337 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 TOE1Q96GM8 510 aaKnown RBP16.92■□□□□ 0.3
LMNA-207ENST00000368301 ZNF582Q96NG8 517 aaPredicted RBP16.92■□□□□ 0.3
LMNA-207ENST00000368301 POLDIP3Q9BY77 421 aaKnown RBP16.92■□□□□ 0.3
LMNA-207ENST00000368301 USP36Q9P275 1121 aaKnown RBP16.92■□□□□ 0.3
LMNA-207ENST00000368301 HS3ST3A1Q9Y663 406 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 SPTBP11277 2137 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 NPIPA5A0A0B4J1W7 369 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 C10orf142B7Z368 130 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 NPIPA7E9PJI5 369 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 HBQ1P09105 142 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 NPIPA8P0DM63 369 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 PRKAR1BP31321 381 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 EFNB1P98172 346 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 SRSF5Q13243 272 aaKnown RBP16.92■□□□□ 0.3
LMNA-207ENST00000368301 SNAPC1Q16533 368 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 MAPK14Q16539 360 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 OCLNQ16625 522 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 NDUFA9Q16795 377 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 DEFB110Q30KQ9 67 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 ZNF836Q6ZNA1 936 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 USP53Q70EK8 1073 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 FAM26EQ8N5C1 309 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 PIK3R3Q92569 461 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 RERGQ96A58 199 aaPredicted RBP16.92■□□□□ 0.3
LMNA-207ENST00000368301 TRPV5Q9NQA5 729 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 TBCCD1Q9NVR7 557 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 CALML5Q9NZT1 146 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 DAPK2Q9UIK4 370 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 RPL36Q9Y3U8 105 aaKnown RBP16.92■□□□□ 0.3
LMNA-207ENST00000368301 WDR45Q9Y484 360 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 KLK4Q9Y5K2 254 aa16.92■□□□□ 0.3
LMNA-207ENST00000368301 C2orf74A8MZ97 194 aa16.91■□□□□ 0.3
LMNA-207ENST00000368301 CCRL2O00421 344 aa16.91■□□□□ 0.3
LMNA-207ENST00000368301 KIAA0513O60268 411 aa16.91■□□□□ 0.3
LMNA-207ENST00000368301 PORP16435 677 aaPredicted RBP16.91■□□□□ 0.3
LMNA-207ENST00000368301 TLX1P31314 330 aaPredicted RBP16.91■□□□□ 0.3
LMNA-207ENST00000368301 VSX2P58304 361 aaPredicted RBP16.91■□□□□ 0.3
LMNA-207ENST00000368301 SFSWAPQ12872 951 aaKnown RBP16.91■□□□□ 0.3
LMNA-207ENST00000368301 TRAM2Q15035 370 aa16.91■□□□□ 0.3
LMNA-207ENST00000368301 GPR68Q15743 365 aa16.91■□□□□ 0.3
LMNA-207ENST00000368301 FHL5Q5TD97 284 aa16.91■□□□□ 0.3
LMNA-207ENST00000368301 TAF8Q7Z7C8 310 aa16.91■□□□□ 0.3
LMNA-207ENST00000368301 OR52I1Q8NGK6 324 aa16.91■□□□□ 0.3
LMNA-207ENST00000368301 RSC1A1Q92681 617 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms