RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SIMC1Q8NDZ2 872 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 OR4K17Q8NGC6 315 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 FAM76AQ8TAV0 307 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 RDH11Q8TC12 318 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 NRGNQ92686 78 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 ALPK1Q96QP1 1244 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 TUBA1CQ9BQE3 449 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 YIPF4Q9BSR8 244 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 EBPLQ9BY08 206 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 EPB41L4BQ9H329 900 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 PIGMQ9H3S5 423 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 MID1IP1Q9NPA3 183 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 SDHAF3Q9NRP4 125 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 CCM2LQ9NUG4 571 aaPredicted RBP13.48□□□□□ -0.25
CTSD-202ENST00000367196 JKAMPQ9P055 326 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 A0A087WV62 115 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 C2orf72A6NCS6 295 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 CLCA1A8K7I4 914 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 GOLGA8RI6L899 631 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 RCBTB2O95199 551 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 PYGBP11216 843 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 GRK2P25098 689 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 CLK3P49761 638 aaKnown RBP13.47□□□□□ -0.25
CTSD-202ENST00000367196 NCBP2P52298 156 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTSD-202ENST00000367196 CORO7P57737 925 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 SRYQ05066 204 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 C2orf80Q0P641 193 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 GANABQ14697 944 aaKnown RBP13.47□□□□□ -0.25
CTSD-202ENST00000367196 CCDC153Q494R4 210 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 CFAP157Q5JU67 520 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 DESI1Q6ICB0 168 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 IKBIPQ70UQ0 350 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 ADGRE4PQ86SQ3 457 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 GRAMD2AQ8IUY3 354 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 SLC44A2Q8IWA5 706 aaPredicted RBP13.47□□□□□ -0.25
CTSD-202ENST00000367196 TRIM42Q8IWZ5 723 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 HOMEZQ8IX15 550 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 C11orf24Q96F05 449 aaPredicted RBP13.47□□□□□ -0.25
CTSD-202ENST00000367196 METTL2AQ96IZ6 378 aaKnown RBP13.47□□□□□ -0.25
CTSD-202ENST00000367196 RBM24Q9BX46 236 aaKnown RBP13.47□□□□□ -0.25
CTSD-202ENST00000367196 IQCGQ9H095 443 aaKnown RBP13.47□□□□□ -0.25
CTSD-202ENST00000367196 GSTO2Q9H4Y5 243 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 PPCSQ9HAB8 311 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 C3orf14Q9HBI5 128 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 Q9N2J8 555 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 RRAGDQ9NQL2 400 aaPredicted RBP13.47□□□□□ -0.25
CTSD-202ENST00000367196 PPP4R1LQ9P1A2 415 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 ABCG2Q9UNQ0 655 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 TIMM22Q9Y584 194 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 ABCA4P78363 2273 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 KIAA1549Q9HCM3 1950 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 ITPR3Q14573 2671 aa13.47□□□□□ -0.25
CTSD-202ENST00000367196 SETD2Q9BYW2 2564 aaPredicted RBP13.46□□□□□ -0.25
CTSD-202ENST00000367196 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 LINC01387J3KSC0 135 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 CD99P14209 185 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 DPP4P27487 766 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 EVI2BP34910 448 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 CCT5P48643 541 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 AGFG1P52594 562 aaKnown RBP13.46□□□□□ -0.25
CTSD-202ENST00000367196 DSCR4P56555 118 aaPredicted RBP13.46□□□□□ -0.25
CTSD-202ENST00000367196 EEFSECP57772 596 aaKnown RBP13.46□□□□□ -0.25
CTSD-202ENST00000367196 SLC29A2Q14542 456 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 BCL2A1Q16548 175 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 DECR1Q16698 335 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 CYP27C1Q4G0S4 372 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 OR2A2Q6IF42 318 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 PAMR1Q6UXH9 720 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 NPSR1Q6W5P4 371 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 ZYG11AQ6WRX3 759 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 P4HA3Q7Z4N8 544 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 OR7G2Q8NG99 324 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 EFHD2Q96C19 240 aaPredicted RBP13.46□□□□□ -0.25
CTSD-202ENST00000367196 MBD6Q96DN6 1003 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 DACH2Q96NX9 599 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 KCNA7Q96RP8 456 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 PTGES2Q9H7Z7 377 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 ANKRA2Q9H9E1 313 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 HHATLQ9HCP6 504 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 MYNNQ9NPC7 610 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 DDX18Q9NVP1 670 aaKnown RBP13.46□□□□□ -0.25
CTSD-202ENST00000367196 CLCF1Q9UBD9 225 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 TBK1Q9UHD2 729 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 MID2Q9UJV3 735 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 FBXL2Q9UKC9 423 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 PACSIN3Q9UKS6 424 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 MED12Q93074 2177 aa13.46□□□□□ -0.25
CTSD-202ENST00000367196 MPDZO75970 2070 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 TTC36A6NLP5 189 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 PLOD2O00469 737 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 RSL1D1O76021 490 aaKnown RBP13.45□□□□□ -0.26
CTSD-202ENST00000367196 RAF1P04049 648 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 JUNP05412 331 aaKnown RBP13.45□□□□□ -0.26
CTSD-202ENST00000367196 CRHP06850 196 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 IFI6P09912 130 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 PEPDP12955 493 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 ZNF708P17019 499 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 SLCO1A2P46721 670 aa13.45□□□□□ -0.26
CTSD-202ENST00000367196 LHX2P50458 406 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms