RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 APBB3O95704 486 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 IFNA4P05014 189 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 CERS1P27544 350 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 CLDN8P56748 225 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 TP53I3Q53FA7 332 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 TMEM53Q6P2H8 277 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 PLXDC1Q8IUK5 500 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 NDNFQ8TB73 568 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 BORCS7Q96B45 105 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 FAM71F1Q96KD3 344 aaPredicted RBP17.43■□□□□ 0.38
SHANK1-202ENST00000359082 BMFQ96LC9 184 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 ARGFXA6NJG6 315 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 RAB4AP20338 218 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 CLCN2P51788 898 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 GRIN2CQ14957 1233 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 NDUFAF5Q5TEU4 345 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 PDZD9Q8IXQ8 264 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 UMODL1-AS1Q8N2C9 162 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 OR5B2Q96R09 309 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 PCYT2Q99447 389 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 FEVQ99581 238 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 USB1Q9BQ65 265 aaKnown RBP17.43■□□□□ 0.38
SHANK1-202ENST00000359082 ACTL7AQ9Y615 435 aa17.43■□□□□ 0.38
SHANK1-202ENST00000359082 BOLA2-SMG1P6H3BVE0 249 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 NFKBIEO00221 500 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 TPPPO94811 219 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 DRD5P21918 477 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 CNR2P34972 360 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 TMEM150AQ86TG1 271 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF681Q96N22 645 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 NKX2-4Q9H2Z4 354 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 NLKQ9UBE8 527 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 PCTPQ9UKL6 214 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 GJE1A6NN92 205 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 C6orf89Q6UWU4 347 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 TOMM40LQ969M1 308 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 H3BML4 177 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF136P52737 540 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 VASH1Q7L8A9 365 aaPredicted RBP17.42■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF551Q7Z340 670 aaPredicted RBP17.42■□□□□ 0.38
SHANK1-202ENST00000359082 TMEM130Q8N3G9 435 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 SPTSSAQ969W0 71 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 FBRSQ9HAH7 460 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 VIPR2P41587 438 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 RING1Q06587 406 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 GRM7Q14831 915 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 OR9Q2Q8NGE9 314 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 OR9A2Q8NGT5 310 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 GIMAP5Q96F15 307 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 B3GNT2Q9NY97 397 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 HAO2Q9NYQ3 351 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 MEIS3P1A6NDR6 274 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 RPS2P15880 293 aaKnown RBP17.42■□□□□ 0.38
SHANK1-202ENST00000359082 PTPN6P29350 595 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 APLNRP35414 380 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 TLE3Q04726 772 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 CDHR3Q6ZTQ4 885 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 ADAMTS18Q8TE60 1221 aa17.42■□□□□ 0.38
SHANK1-202ENST00000359082 A6NL46 340 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 LAMP1P11279 417 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ETV5P41161 510 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ARSDP51689 593 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SH3BP2P78314 561 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 NKX3-2P78367 333 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 CEACAM7Q14002 265 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 MANEALQ5VSG8 457 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ANKRD54Q6NXT1 300 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 RELL1Q8IUW5 271 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 WDTC1Q8N5D0 677 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 MALSU1Q96EH3 234 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SAMD11Q96NU1 681 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 MTHFD2LQ9H903 347 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SLCO3A1Q9UIG8 710 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF225Q9UK10 706 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 LCATP04180 440 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 DLSTP36957 453 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ELAVL3Q14576 367 aaKnown RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 C6orf132Q5T0Z8 1188 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 MEX3DQ86XN8 651 aaKnown RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SLC5A8Q8N695 610 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 CCDC71LQ8N9Z2 235 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 FRS2Q8WU20 508 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 NMNAT1Q9HAN9 279 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 CNIH4Q9P003 139 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 HNRNPA1P09651 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 C5AR1P21730 350 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SPINT3P49223 89 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SQSTM1Q13501 440 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 PM20D2Q8IYS1 436 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 OR5W2Q8NH69 310 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SDSLQ96GA7 329 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 CCDC32Q9BV29 185 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 LHPPQ9H008 270 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 STYXL1Q9Y6J8 313 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 CYP4V2Q6ZWL3 525 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 CHDHQ8NE62 594 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 PRR11Q96HE9 360 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SERINC2Q96SA4 455 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 PPP1R14DQ9NXH3 145 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms