RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 DDCP20711 480 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 ZFP41Q8N8Y5 198 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 ATG4BQ9Y4P1 393 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 HEPACAM2A8MVW5 462 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 H0YAE9 185 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 WNT7AO00755 349 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 RABIFP47224 123 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 NPBWR1P48145 328 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 CCL14Q16627 93 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 ATG9BQ674R7 924 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 KBTBD6Q86V97 674 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 CLEC1AQ8NC01 280 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 OR2A12Q8NGT7 310 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 SALL4Q9UJQ4 1053 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 RHBDD3Q9Y3P4 386 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC2A1P11166 492 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 VEGFCP49767 419 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 SHC2P98077 582 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 DNAJC22Q8N4W6 341 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 ABCG5Q9H222 651 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 B3GNT3Q9Y2A9 372 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 PRAMEF2O60811 474 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 ACRV1P26436 265 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 IQCF1Q8N6M8 205 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 SPHK2Q9NRA0 654 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 TEX264Q9Y6I9 313 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 A0A1W2PQU0 124 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 C1orf226A1L170 272 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 CHRNB1P11230 501 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 C14orf28Q4W4Y0 310 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 COQ5Q5HYK3 327 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 DYNLRB1Q9NP97 96 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 MCTS1Q9ULC4 181 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 H3BML4 177 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 GRM7Q14831 915 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 BCL9O00512 1426 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 BPIP17213 487 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 DAP3P51398 398 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 GALNT2Q10471 571 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 ZNF767PQ75MW2 155 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 CHDHQ8NE62 594 aaPredicted RBP5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 PLEKHM1Q9Y4G2 1056 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 ENSAO43768 121 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 CLEC3BP05452 202 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 NCS1P62166 190 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 ARHGAP19Q14CB8 494 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 PAFAH1B3Q15102 231 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 PKDCCQ504Y2 493 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 PLBD1Q6P4A8 553 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 SNX18Q96RF0 628 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 HOXD1Q9GZZ0 328 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 F5H5P2 479 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 LCMT2O60294 686 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 RASAL1O95294 804 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 SOD2P04179 222 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 RPL35P42766 123 aaKnown RBP5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 PTPRCAPQ14761 206 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 TLDC1Q6P9B6 456 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 FAM83FQ8NEG4 500 aaPredicted RBP5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 TCTEX1D2Q8WW35 142 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 HERPUD2Q9BSE4 406 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 DPH7Q9BTV6 452 aa5.5□□□□□ -1.53
SRGAP1-201ENST00000355086 KIF20BQ96Q89 1820 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 ANHXE9PGG2 379 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 E9PI62 339 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 PTPN6P29350 595 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 LMAN2Q12907 356 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 NFATC4Q14934 902 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 TRMT2BQ96GJ1 504 aaKnown RBP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 NME7Q9Y5B8 376 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 ZNF705GA8MUZ8 300 aaPredicted RBP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 UBL4AP11441 157 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC18A1P54219 525 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 TAS2R31P59538 309 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 RPS26P62854 115 aaKnown RBP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 C3orf38Q5JPI3 329 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 CST9LP1Q5W188 147 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 ZNF461Q8TAF7 563 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 MADDQ8WXG6 1647 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 CRABP1P29762 137 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 EEF1A2Q05639 463 aaKnown RBP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 ARL6IP1Q15041 203 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 ZNF783Q6ZMS7 281 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 CREB3L2Q70SY1 520 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC35F2Q8IXU6 374 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 SNAPC3Q92966 411 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 FKRPQ9H9S5 495 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 ALDOAP04075 364 aaKnown RBP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 GAAP10253 952 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC11A1P49279 550 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 PAN3Q58A45 887 aaKnown RBP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 OR52E8Q6IFG1 317 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 LARP4Q71RC2 724 aaKnown RBP eCLIP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 GPR155Q7Z3F1 870 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 CRB3Q9BUF7 120 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 CEBPZOSA8MTT3 80 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 PDLIM3Q53GG5 364 aaPredicted RBP5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 KCNIP4Q6PIL6 250 aa5.49□□□□□ -1.53
SRGAP1-201ENST00000355086 ZNF689Q96CS4 500 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms