RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TMBIM6P55061 237 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 CDH11P55287 796 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 GINS1Q14691 196 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 PON3Q15166 354 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 TRAM1Q15629 374 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 FANK1Q8TC84 345 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 PIK3R3Q92569 461 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 DEFB126Q9BYW3 111 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 KLHL21Q9UJP4 597 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 NAALAD2Q9Y3Q0 740 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 ZSWIM8A7E2V4 1837 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 VILLO15195 856 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.57
SMAD9-201ENST00000350148 TMEM156Q8N614 296 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF583Q96ND8 569 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 LPAR4Q99677 370 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 MED28Q9H204 178 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 RDH8Q9NYR8 311 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 WNT16Q9UBV4 365 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 FAM240BA0A1B0GVZ2 78 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 ACOT8O14734 319 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 AIFM1O95831 613 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 OSMP13725 252 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 ACTC1P68032 377 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 ACTA1P68133 377 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 CES4AQ5XG92 561 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 SLITRK4Q8IW52 837 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 TMEM151BQ8IW70 566 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 IZUMO1Q8IYV9 350 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 COQ8BQ96D53 544 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 PRRC1Q96M27 445 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 AIFM2Q9BRQ8 373 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 BRD7Q9NPI1 651 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 A0A1W2PPC4 97 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF670-ZNF695F2Z2N8 137 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 MC3RP41968 323 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 MC1RQ01726 317 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 GPR18Q14330 331 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 MEP1AQ16819 746 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 OR10H4Q8NGA5 316 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 OR9A2Q8NGT5 310 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 EDAQ92838 391 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 EGLN2Q96KS0 407 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 OR14I1A6ND48 311 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 OR5K3A6NET4 321 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 CD36P16671 472 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 MFSD13AQ14CX5 517 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 UGT2A3Q6UWM9 527 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 DNAJA4Q8WW22 397 aaPredicted RBP11.46□□□□□ -0.58
SMAD9-201ENST00000350148 SGTBQ96EQ0 304 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 TMEM138Q9NPI0 162 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 PCDHGB5Q9Y5G0 923 aa11.46□□□□□ -0.58
SMAD9-201ENST00000350148 TMEM202A6NGA9 273 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 C12orf71A8MTZ7 269 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 CEACAM5P06731 702 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 NUDT7P0C024 238 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 TACR1P25103 407 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 PCSK6P29122 969 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 HBA1P69905 142 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF45Q02386 682 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 RAPSNQ13702 412 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 C14orf28Q4W4Y0 310 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 TMEM215Q68D42 235 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 ARHGAP11AQ6P4F7 1023 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF613Q6PF04 617 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 POMZP3Q6PJE2 187 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF574Q6ZN55 896 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 FAM83HQ6ZRV2 1179 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 OR51V1Q9H2C8 321 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 TRIM36Q9NQ86 728 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 TRIP11Q15643 1979 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 CENPBD1B2RD01 187 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 RDH16O75452 317 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 HMGN2P05204 90 aaKnown RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 PRR35P0CG20 571 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 NDUFAF6Q330K2 333 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 TP53I13Q8NBR0 393 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 CADM4Q8NFZ8 388 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 FANCFQ9NPI8 374 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 SYT5O00445 386 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 PNMTP11086 282 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 ACSL1P33121 698 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 CSTF1Q05048 431 aaKnown RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 ADNP2Q6IQ32 1131 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 OR10Q1Q8NGQ4 319 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 OR8K3Q8NH51 312 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 RLN3Q8WXF3 142 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 ISOC1Q96CN7 298 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 ERMAPQ96PL5 475 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 SOX17Q9H6I2 414 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 MKLN1Q9UL63 735 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 TLX2O43763 284 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 IGHEP01854 428 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 CXCR4P61073 352 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 RPS26P62854 115 aaKnown RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 CCSMST1Q4G0I0 132 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 SLC48A1Q6P1K1 146 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 USP53Q70EK8 1073 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 LILRA3Q8N6C8 439 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-201ENST00000350148 TBC1D20Q96BZ9 403 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms