RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 SLC5A7Q9GZV3 580 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 HRASLS2Q9NWW9 162 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ABI3Q9P2A4 366 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 CNOT11Q9UKZ1 510 aaKnown RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 RASD1Q9Y272 281 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 AKAP11Q9UKA4 1901 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SPEGQ15772 3267 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 TLX3O43711 291 aaPredicted RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 PFKMP08237 780 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 PRKCAP17252 672 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 RGRP47804 291 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 RCAN2Q14206 197 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 CCNJQ5T5M9 372 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ZNF529Q6P280 563 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 TBPL2Q6SJ96 375 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 GTPBP8Q8N3Z3 284 aaPredicted RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 OR7G3Q8NG95 312 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 OR4K14Q8NGD5 310 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 GLYATL1Q969I3 302 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 C3orf49Q96BT1 292 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 OR5M11Q96RB7 305 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 THAP7Q9BT49 309 aaPredicted RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 MROQ9BYG7 248 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 KLHL9Q9P2J3 617 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SPTBN2O15020 2390 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 TCRBV3S1A0A5B6 114 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 EDIL3O43854 480 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 PEX14O75381 377 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 TRAPPC6AO75865 159 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 PPP1R3DO95685 299 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ADAP00813 363 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 CLEC2LP0C7M8 214 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 HLA-DMAP28067 261 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 POU3F4P49335 361 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SGCAQ16586 387 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 RTP2Q5QGT7 225 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 P4HA3Q7Z4N8 544 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 TECPR1Q7Z6L1 1165 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 CD163Q86VB7 1156 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ZNF283Q8N7M2 679 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 NLGN4YQ8NFZ3 816 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 LILRB4Q8NHJ6 448 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 TOMM40LQ969M1 308 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 DDX31Q9H8H2 851 aaKnown RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 DCAF13Q9NV06 445 aaKnown RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 C14orf166Q9Y224 244 aaKnown RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 PCDHGB1Q9Y5G3 927 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 GPR45Q9Y5Y3 372 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ENPP4Q9Y6X5 453 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 A0A1W2PP55 124 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 LEFTY2O00292 366 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 PTHP01270 115 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 S1PR1P21453 382 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 HTR2AP28223 471 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 HMGCLP35914 325 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 DPP6P42658 865 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 LUMP51884 338 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 SCAPQ12770 1279 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 VASNQ6EMK4 673 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 DCUN1D3Q8IWE4 304 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 LSMEM2Q8N112 164 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 TMEM102Q8N9M5 508 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 MDGA1Q8NFP4 955 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 OR56A1Q8NGH5 318 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SPRYD4Q8WW59 207 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 TREX2Q9BQ50 279 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 DHRS4Q9BTZ2 278 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ACPTQ9BZG2 426 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 FOLH1BQ9HBA9 442 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ANKMY1Q9P2S6 941 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 OR52A4PA6NMU1 304 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SLC19A2O60779 497 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 DCNP07585 359 aaKnown RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 UCHL1P09936 223 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SDHBP21912 280 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ITGB8P26012 769 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 CD70P32970 193 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 PXDC1Q5TGL8 231 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 PLAG1Q6DJT9 500 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 FAM198BQ6UWH4 519 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SAMD14Q8IZD0 417 aaPredicted RBP8.24□□□□□ -1.09
RTN3-202ENST00000339997 CADM3Q8N126 398 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 STK35Q8TDR2 534 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 THAP4Q8WY91 577 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 GGHQ92820 318 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 PTCHD1Q96NR3 888 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 MFFQ9GZY8 342 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 REV1Q9UBZ9 1251 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 FBXL2Q9UKC9 423 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 B3GALT1Q9Y5Z6 326 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 ROBO1Q9Y6N7 1651 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 DMDP11532 3685 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 IRS2Q9Y4H2 1338 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 A0A0U1RQK1 487 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 A0A1B0GVI7 797 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 UNC119BA6NIH7 251 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 SCO1O75880 301 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 STC2O76061 302 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 INHAP05111 366 aa8.24□□□□□ -1.09
RTN3-202ENST00000339997 PBX2P40425 430 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms