RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SMIM24O75264 130 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 SMNDC1O75940 238 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC01116-202ENST00000339037 TGM6O95932 706 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 TCEA1P23193 301 aaKnown RBP14.15□□□□□ -0.14
LINC01116-202ENST00000339037 KRT20P35900 424 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 OR5M10Q6IEU7 315 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 OR2A2Q6IF42 318 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 P4HA3Q7Z4N8 544 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 SELENOMQ8WWX9 145 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 PIGTQ969N2 578 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 TM4SF18Q96CE8 201 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 SLC35A4Q96G79 324 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 COX4I2Q96KJ9 171 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 ZNF681Q96N22 645 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 BTBD9Q96Q07 612 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 ADOQ96SZ5 270 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 PIP5K1AQ99755 562 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 TSPYL1Q9H0U9 437 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 BRF2Q9HAW0 419 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 PFDN4Q9NQP4 134 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 ZNF226Q9NYT6 803 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 C6orf203Q9P0P8 240 aaPredicted RBP14.15□□□□□ -0.14
LINC01116-202ENST00000339037 UTS2RQ9UKP6 389 aa14.15□□□□□ -0.14
LINC01116-202ENST00000339037 CTIFO43310 598 aaKnown RBP14.14□□□□□ -0.15
LINC01116-202ENST00000339037 HCRTR2O43614 444 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 BCAS2O75934 225 aaPredicted RBP14.14□□□□□ -0.15
LINC01116-202ENST00000339037 OTCP00480 354 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 PDYNP01213 254 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 CRHP06850 196 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 RPS17P08708 135 aaKnown RBP14.14□□□□□ -0.15
LINC01116-202ENST00000339037 SBK3P0C264 359 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 CTAGE8P0CG41 777 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 IL12BP29460 328 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 PSPHP78330 225 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 FAM27E3Q08E93 113 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 EFR3AQ14156 821 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 TSNAXIP1Q2TAA8 658 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 ZNF628Q5EBL2 1059 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 LETMD1Q6P1Q0 360 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 CHMP1BQ7LBR1 199 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 CTAGE4Q8IX94 777 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 LRRC75A-AS1Q8N1F1 130 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 C1orf52Q8N6N3 182 aaKnown RBP14.14□□□□□ -0.15
LINC01116-202ENST00000339037 GBP7Q8N8V2 638 aaPredicted RBP14.14□□□□□ -0.15
LINC01116-202ENST00000339037 CNEP1R1Q8N9A8 125 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 MNS1Q8NEH6 495 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 ZNF675Q8TD23 568 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 FAM111AQ96PZ2 611 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 HBEGFQ99075 208 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 MED18Q9BUE0 208 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 NMRK1Q9NWW6 199 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 KLHL28Q9NXS3 571 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 ZNF180Q9UJW8 692 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 SNX6Q9UNH7 406 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 ROS1P08922 2347 aa14.14□□□□□ -0.15
LINC01116-202ENST00000339037 A0A087WUV0 522 aaPredicted RBP14.13□□□□□ -0.15
LINC01116-202ENST00000339037 SLC22A20A6NK97 555 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 DEFB108AA8MXU0 73 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 PPP6CO00743 305 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 ESRRBO95718 433 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 LY6G6DO95868 133 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 CT45A8P0DMV1 189 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 CT45A9P0DMV2 189 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 COL6A2P12110 1019 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 TSPAN8P19075 237 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 GRK2P25098 689 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 DPP4P27487 766 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 GCAP28676 217 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 PCYT1AP49585 367 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 CORO7P57737 925 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 TRA2BP62995 288 aaKnown RBP14.13□□□□□ -0.15
LINC01116-202ENST00000339037 BCL2A1Q16548 175 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 ERCC6LQ2NKX8 1250 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 GLE1Q53GS7 698 aaKnown RBP14.13□□□□□ -0.15
LINC01116-202ENST00000339037 CT45A2Q5DJT8 189 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 LARP4Q71RC2 724 aaKnown RBP eCLIP14.13□□□□□ -0.15
LINC01116-202ENST00000339037 TMEM151AQ8N4L1 468 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 OR4K17Q8NGC6 315 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 NUDT8Q8WV74 236 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 ERP27Q96DN0 273 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 STARD4Q96DR4 205 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 VSTM2LQ96N03 204 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 WFIKKN1Q96NZ8 548 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 CCL19Q99731 98 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 MRPL57Q9BQC6 102 aaKnown RBP14.13□□□□□ -0.15
LINC01116-202ENST00000339037 MRPL46Q9H2W6 279 aaKnown RBP14.13□□□□□ -0.15
LINC01116-202ENST00000339037 ANKRA2Q9H9E1 313 aa14.13□□□□□ -0.15
LINC01116-202ENST00000339037 MRPS18CQ9Y3D5 142 aaKnown RBP14.13□□□□□ -0.15
LINC01116-202ENST00000339037 EXOC1LA0A1B0GW35 172 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 A8MT66 165 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 H7C1Q1 480 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 SIAH2O43255 324 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 ZIC3O60481 467 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 TSPAN2O60636 221 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 FPR1P21462 350 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 CD79BP40259 229 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 MC3RP41968 323 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 CDH13P55290 713 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 VWA1Q6PCB0 445 aa14.12□□□□□ -0.15
LINC01116-202ENST00000339037 NPSR1Q6W5P4 371 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms