RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 UPRTQ96BW1 309 aa11.65□□□□□ -0.54
FN1-202ENST00000336916 CHMP24386 653 aa11.65□□□□□ -0.55
FN1-202ENST00000336916 KLF1Q13351 362 aaPredicted RBP11.65□□□□□ -0.55
FN1-202ENST00000336916 C1orf94Q6P1W5 598 aa11.65□□□□□ -0.55
FN1-202ENST00000336916 GDPGP1Q6ZNW5 385 aa11.65□□□□□ -0.55
FN1-202ENST00000336916 ZNF595Q8IYB9 648 aa11.65□□□□□ -0.55
FN1-202ENST00000336916 NAXEQ8NCW5 288 aa11.65□□□□□ -0.55
FN1-202ENST00000336916 TREX2Q9BQ50 279 aaPredicted RBP11.65□□□□□ -0.55
FN1-202ENST00000336916 IGKV6D-21A0A0A0MT36 114 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 CXorf49A8MYA2 514 aaPredicted RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 C8orf89P0DMQ9 161 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 CPT2P23786 658 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 IL32P24001 234 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 CD38P28907 300 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 PLGLAQ15195 96 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 MANEAQ5SRI9 462 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ZNF675Q8TD23 568 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ECHDC3Q96DC8 303 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 TOR3AQ9H497 397 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ASB4Q9Y574 426 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 C13orf42A0A1B0GVH6 325 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ZNF850A8MQ14 1090 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 C9JVG2 144 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 H3BNC9 293 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 OLFM2O95897 454 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ZNF182P17025 639 aaPredicted RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 ARF3P61204 181 aaPredicted RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 ARF1P84077 181 aaKnown RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 NPY5RQ15761 445 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 DNAJC22Q8N4W6 341 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 SFXN2Q96NB2 322 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 DNAJC25-GNG10A0A024R161 153 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 C17orf113A0A1B0GUU1 675 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 CH25HO95992 272 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 MTNR1AP48039 350 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ART1P52961 327 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ASB17Q8WXJ9 295 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 FOLH1BQ9HBA9 442 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 CDC123O75794 336 aaPredicted RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 ITGB2P05107 769 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 MMP12P39900 470 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 PITPNBP48739 271 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 BTBD16Q32M84 506 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 RAB12Q6IQ22 244 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 MRPL21Q7Z2W9 205 aaKnown RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.64□□□□□ -0.551e-8■■■□□ 16.1
FN1-202ENST00000336916 PM20D2Q8IYS1 436 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 OR52N2Q8NGI0 321 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 TSACCQ96A04 125 aaPredicted RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 TMEM168Q9H0V1 697 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ZNF701Q9NV72 531 aaPredicted RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 CLEC4EQ9ULY5 219 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 PRELID3BQ9Y3B1 194 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 PCDHA9Q9Y5H5 950 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 SBF2Q86WG5 1849 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 AKR1D1P51857 326 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ANKDD1AQ495B1 522 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 ITM2AO43736 263 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 BPIP17213 487 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 GDF5P43026 501 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 GINS1Q14691 196 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 CCSAPQ6IQ19 270 aaPredicted RBP11.64□□□□□ -0.55
FN1-202ENST00000336916 PQLC3Q8N755 202 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 BTBD2Q9BX70 525 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 POLE4Q9NR33 117 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 SALL4Q9UJQ4 1053 aa11.64□□□□□ -0.55
FN1-202ENST00000336916 XKR5Q6UX68 686 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 ZNF765Q7L2R6 523 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 PEBP4Q96S96 227 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 EBF4Q9BQW3 602 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 SARDHQ9UL12 918 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 AGAP5A6NIR3 686 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 IFNA4P05014 189 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 DLSTP36957 453 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 RRAS2P62070 204 aaPredicted RBP11.63□□□□□ -0.55
FN1-202ENST00000336916 OGDHQ02218 1023 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 DTD2Q96FN9 168 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 ZNF442Q9H7R0 627 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 IGKV6-21A0A0C4DH24 114 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 WASH4PA8MWX3 477 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 GJB5O95377 273 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 ADAP00813 363 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 GBAP04062 536 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 XRCC1P18887 633 aaPredicted RBP11.63□□□□□ -0.55
FN1-202ENST00000336916 SLC9A3P48764 834 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 SAMD12Q8N8I0 201 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 OR5H2Q8NGV7 314 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 SLC19A3Q9BZV2 496 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 LMAN1LQ9HAT1 526 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 SLC2A6Q9UGQ3 507 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 MBLAC1A4D2B0 266 aaPredicted RBP11.63□□□□□ -0.55
FN1-202ENST00000336916 ANKRD30BLA7E2S9 258 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 LRFN4Q6PJG9 635 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 ZNF321PQ8N8H1 164 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 MRPL43Q8N983 215 aaKnown RBP11.63□□□□□ -0.55
FN1-202ENST00000336916 AGBL5Q8NDL9 886 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 PEX11GQ96HA9 241 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 NSG1A0A0A6YYJ2 146 aa11.63□□□□□ -0.55
FN1-202ENST00000336916 NPR2P20594 1047 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms