RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HCN3Q9P1Z3 774 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ZNF229Q9UJW7 825 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 DNMT3AQ9Y6K1 912 aaPredicted RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 GXYLT2A0PJZ3 443 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 A8MVJ9 347 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 SULT1C4O75897 302 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 PDE9AO76083 593 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 LGI1O95970 557 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 RPLP0P05388 317 aaKnown RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 POU2F2P09086 479 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 CCNYL3P0C7X3 344 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 MYF5P13349 255 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 SPNP16150 400 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 PORP16435 677 aaPredicted RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 HNRNPA2B1P22626 353 aaKnown RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 MAZP56270 477 aaKnown RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 FOXL2P58012 376 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ADAM15Q13444 863 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ZNF846Q147U1 533 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 NDUFAF6Q330K2 333 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 INAVAQ3KP66 663 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 FLYWCH1Q4VC44 716 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 PLAG1Q6DJT9 500 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 PLEKHM3Q6ZWE6 761 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 HOMEZQ8IX15 550 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 DTX3Q8N9I9 347 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 AVL9Q8NBF6 648 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 DENND6BQ8NEG7 585 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 OR4N2Q8NGD1 307 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 OR9Q1Q8NGQ5 310 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 OR9A4Q8NGU2 314 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 PFN4Q8NHR9 129 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 TP53INP1Q96A56 240 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 TOE1Q96GM8 510 aaKnown RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 OPALINQ96PE5 141 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 OR2A5Q96R48 311 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 TM9SF2Q99805 663 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 CDADC1Q9BWV3 514 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 POLR2J2Q9GZM3 115 aaKnown RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 NECTIN3Q9NQS3 549 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 OSGIN1Q9UJX0 560 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 SLC7A7Q9UM01 511 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 GMEB1Q9Y692 573 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 CLCA3PQ9Y6N3 262 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.27□□□□□ -1.08
SNCA-201ENST00000336904 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.27□□□□□ -1.08
SNCA-201ENST00000336904 PRR19A6NJB7 356 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 FAAHO00519 579 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 CDC42EP2O14613 210 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 PLD2O14939 933 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 EMC8O43402 210 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 ADAP00813 363 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 TNFRSF4P43489 277 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 PRR5P85299 388 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 RGS1Q08116 209 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 ZNF404Q494X3 552 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 GXYLT1Q4G148 440 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 TMEM35AQ53FP2 167 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 SYT14P1Q58G82 188 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 RRM2BQ7LG56 351 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 MORN4Q8NDC4 146 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 FLVCR1-AS1Q8TAF5 88 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 GIMAP5Q96F15 307 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 C10orf90Q96M02 699 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 MCHR1Q99705 422 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 RACGAP1Q9H0H5 632 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 HHATLQ9HCP6 504 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 SNX7Q9UNH6 387 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 TSC22D4Q9Y3Q8 395 aa8.27□□□□□ -1.08
SNCA-201ENST00000336904 SPAG17Q6Q759 2223 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 DSPPQ9NZW4 1301 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 SEMA4FO95754 770 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 ACP2P11117 423 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 ST6GAL1P15907 406 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 SSTR4P31391 388 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 GIPRP48546 466 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 SLC16A1P53985 500 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 ZNF791Q3KP31 576 aaPredicted RBP8.27□□□□□ -1.09
SNCA-201ENST00000336904 LRRC25Q8N386 305 aaPredicted RBP8.27□□□□□ -1.09
SNCA-201ENST00000336904 GPR151Q8TDV0 419 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 DCLRE1CQ96SD1 692 aaKnown RBP8.27□□□□□ -1.09
SNCA-201ENST00000336904 DPH1Q9BZG8 443 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 C20orf141Q9NUB4 165 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 FKBP14Q9NWM8 211 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 MAT2BQ9NZL9 334 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 CPNE7Q9UBL6 633 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 KCNE5Q9UJ90 142 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 WDR45Q9Y484 360 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 PCDH15Q96QU1 1955 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 CNTRLQ7Z7A1 2325 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 A0A0A6YYC8 382 aaPredicted RBP8.27□□□□□ -1.09
SNCA-201ENST00000336904 I3L1I5 382 aaPredicted RBP8.27□□□□□ -1.09
SNCA-201ENST00000336904 SERPINI2O75830 405 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 MED26O95402 600 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 CD40LGP29965 261 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 GSTM5P46439 218 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 ILF3Q12906 894 aaKnown RBP eCLIP8.27□□□□□ -1.09
SNCA-201ENST00000336904 C22orf42Q6IC83 251 aa8.27□□□□□ -1.09
SNCA-201ENST00000336904 TYW3Q6IPR3 259 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms