RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 OR4Q3Q8NH05 313 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ENKURQ8TC29 256 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 RASSF5Q8WWW0 418 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 UFD1Q92890 307 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 PPP1R16AQ96I34 528 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 FRMD6Q96NE9 622 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ASB16Q96NS5 453 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 GDF15Q99988 308 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 PELI2Q9HAT8 420 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 MYO15AQ9UKN7 3530 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CLCA2Q9UQC9 943 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 CSNK1G3Q9Y6M4 447 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 A0A1B0GVC2 190 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ZC3H12DA2A288 527 aaKnown RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 LRIT2A6NDA9 550 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 A6NIN4 97 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 MAN2B1O00754 1011 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ERI3O43414 337 aaKnown RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ERGP11308 486 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ACP5P13686 325 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 TRIM23P36406 574 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 P2RY2P41231 377 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 TAS2R38P59533 333 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 RAB8AP61006 207 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 DPTQ07507 201 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 COX10Q12887 443 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ELAVL3Q14576 367 aaKnown RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF234Q14588 700 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 MLF2Q15773 248 aaPredicted RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 KLHL22Q53GT1 634 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 RNLSQ5VYX0 342 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 SLC36A4Q6YBV0 504 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 NOXA1Q86UR1 476 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 Q8N402 240 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 KAT2AQ92830 837 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 FGF13Q92913 245 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 FERD3LQ96RJ6 166 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 DDX31Q9H8H2 851 aaKnown RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 ACSS1Q9NUB1 689 aaPredicted RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 IMP3Q9NV31 184 aaKnown RBP11.56□□□□□ -0.56
VPS33B-201ENST00000333371 NLKQ9UBE8 527 aa11.56□□□□□ -0.56
VPS33B-201ENST00000333371 TBC1D3BA6NDS4 549 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 OR6C70A6NIJ9 312 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 OR52A4PA6NMU1 304 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 VEGFDO43915 354 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 FCMRO60667 390 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 TBX19O60806 448 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 ZIC2O95409 532 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 SLC2A2P11168 524 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 FUT1P19526 365 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 BCL6P41182 706 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 MC3RP41968 323 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 CTBP2P56545 445 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 RAB40BQ12829 278 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF155Q12901 538 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 TPBGQ13641 420 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 IL18Q14116 193 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 LTB4RQ15722 352 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 ZNF311Q5JNZ3 666 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 FAM109BQ6ICB4 259 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 CD300LDQ6UXZ3 194 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 LRRTM4Q86VH4 590 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 MARCH9Q86YJ5 346 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 GDPD1Q8N9F7 314 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 CXorf40AQ8TE69 158 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 C12orf66Q96MD2 445 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 ARHGAP9Q9BRR9 750 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 SFXN1Q9H9B4 322 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 MBNL1Q9NR56 388 aaKnown RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 KCNK6Q9Y257 313 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 TRANK1O15050 2925 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 PRR23AA6NEV1 266 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 SOCS6O14544 535 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 CCNYL3P0C7X3 344 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 ACADMP11310 421 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 DDX5P17844 614 aaKnown RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 SDHBP21912 280 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 CERS1P27544 350 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 WASP42768 502 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 SLC1A3P43003 542 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 KHKP50053 298 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 CDH11P55287 796 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 CDK3Q00526 305 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 TATDN3Q17R31 274 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 METRNLQ641Q3 311 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 UBE2Q1Q7Z7E8 422 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 IL17RCQ8NAC3 791 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 TMIEQ8NEW7 156 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 OR9A2Q8NGT5 310 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 SUSD6Q92537 303 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 COX14Q96I36 57 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 QRFPRQ96P65 431 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 GFM1Q96RP9 751 aaKnown RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 INSM2Q96T92 566 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 TBX5Q99593 518 aa11.55□□□□□ -0.56
VPS33B-201ENST00000333371 FGF20Q9NP95 211 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-201ENST00000333371 SPTBN5Q9NRC6 3674 aaKnown RBP11.54□□□□□ -0.56
VPS33B-201ENST00000333371 LOC102723532A0A0G2JNH3 316 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 TMEM129A0AVI4 362 aa11.54□□□□□ -0.56
VPS33B-201ENST00000333371 STK25O00506 426 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms