RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ST3GAL3Q11203 375 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 HNRNPDQ14103 355 aaKnown RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 TRAM1Q15629 374 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 CST9LP1Q5W188 147 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 LILRB2Q8N423 598 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 MAPK15Q8TD08 544 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 HYLS1Q96M11 299 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 TWNKQ96RR1 684 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 HRASLS2Q9NWW9 162 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 PSMB10P40306 273 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 AKR1C2P52895 323 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 CEACAM7Q14002 265 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 C10orf62Q5T681 223 aaPredicted RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 CCDC71Q8IV32 467 aaPredicted RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 PTCHD1Q96NR3 888 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 MRM3Q9HC36 420 aaKnown RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 GPR34Q9UPC5 381 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 ADAM18Q9Y3Q7 739 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 GGT2P36268 569 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 CD79BP40259 229 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 TP53I3Q53FA7 332 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 RNASE10Q5GAN6 216 aaKnown RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 METTL2BQ6P1Q9 378 aaKnown RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 HACD2Q6Y1H2 254 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 IL17RDQ8NFM7 739 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 PAPOLGQ9BWT3 736 aaKnown RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 PTGES2Q9H7Z7 377 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 SLC7A11Q9UPY5 501 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 LMTK2Q8IWU2 1503 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 STK17BO94768 372 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 TMEM11P17152 192 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 HTR1EP28566 365 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 SPHARQ15513 63 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 GPR19Q15760 415 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 DEFB134Q4QY38 66 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 TMEM150AQ86TG1 271 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 CILP2Q8IUL8 1156 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 IRAK2O43187 625 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 ACPPP15309 386 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 GABARAPL2P60520 117 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 SLC35F2Q8IXU6 374 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 FAM86B1Q8N7N1 296 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 OR9Q2Q8NGE9 314 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 KIAA1191Q96A73 305 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 FEVQ99581 238 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 EFCAB11Q9BUY7 163 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 MAGED1Q9Y5V3 778 aaPredicted RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 NRP1O14786 923 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 SC5DO75845 299 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 ETV5P41161 510 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 SLAMF1Q13291 335 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 SPCS2Q15005 226 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 FIGNL1Q6PIW4 674 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 ZNF679Q8IYX0 411 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 UQCC2Q9BRT2 126 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 DOHHQ9BU89 302 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 ENPP5Q9UJA9 477 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 FBXO24O75426 580 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 HLCSP50747 726 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 LPAL2Q16609 132 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 VASNQ6EMK4 673 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 NADSYN1Q6IA69 706 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 BAIAP2L2Q6UXY1 529 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 OR9A1PQ8NGU1 263 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 WFIKKN2Q8TEU8 576 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 C11orf49Q9H6J7 331 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 FETUBQ9UGM5 382 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 C6P13671 934 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 YIF1BQ5BJH7 314 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 DPY19L2P1Q6NXN4 242 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 BRAT1Q6PJG6 821 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 MEX3BQ6ZN04 569 aaKnown RBP7.52□□□□□ -1.21
CIITA-201ENST00000324288 METTL4Q8N3J2 472 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 ZNF439Q8NDP4 499 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 CLEC4DQ8WXI8 215 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 IL17FQ96PD4 163 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 SGIP1Q9BQI5 828 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 FNIP2Q9P278 1114 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 ANKMY1Q9P2S6 941 aa7.52□□□□□ -1.21
CIITA-201ENST00000324288 LOC102723532A0A0G2JNH3 316 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SULT1C2O00338 296 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 HOXB5P09067 269 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 AARDQ4LEZ3 155 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 PDZD11Q5EBL8 140 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SPRYD7Q5W111 196 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 STEAP2Q8NFT2 490 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 OR56A3Q8NH54 315 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 C14orf79Q96F83 325 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 FOXN4Q96NZ1 517 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 SORBS1Q9BX66 1292 aaKnown RBP7.51□□□□□ -1.21
CIITA-201ENST00000324288 REEP4Q9H6H4 257 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 GALNT9Q9HCQ5 603 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 CRTAC1Q9NQ79 661 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 HEATR5AQ86XA9 2040 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 FAM189A1O60320 539 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 LEFTY1O75610 366 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 HPRP00739 348 aa7.51□□□□□ -1.21
CIITA-201ENST00000324288 NPPAP01160 153 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms