RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR1M1Q8NGA1 313 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 TAAR8Q969N4 342 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM169Q96HH4 297 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 FAM46AQ96IP4 442 aaKnown RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 DZANK1Q9NVP4 752 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 PSORS1C1Q9UIG5 152 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 AGRNO00468 2067 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF736B4DX44 427 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 RNF13O43567 381 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 ALDOCP09972 364 aaKnown RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 TGM1P22735 817 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 TGM4P49221 684 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 MCCD1P59942 119 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF252P-AS1Q0IIN9 211 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 INAVAQ3KP66 663 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 TCTE1Q5JU00 501 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 AUTS2Q8WXX7 1259 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 RPL3LQ92901 407 aaKnown RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 HRASLS5Q96KN8 279 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SLX1AQ9BQ83 275 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 MCCC2Q9HCC0 563 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 TXNL4BQ9NX01 149 aaKnown RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 LRFN1Q9P244 771 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 GMPR2Q9P2T1 348 aaKnown RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 UTS2RQ9UKP6 389 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 BOLA1Q9Y3E2 137 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 UNC119BA6NIH7 251 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 UBXN7O94888 489 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 DCNP07585 359 aaKnown RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SMIM10L2AP0DMW4 78 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SMIM10L2BP0DMW5 78 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SERPINF1P36955 418 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SELENOWP63302 87 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 OPCMLQ14982 345 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 PLK5Q496M5 336 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 ATXN7L2Q5T6C5 722 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SCGB1C1Q8TD33 95 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 TRIB2Q92519 343 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 COPS5Q92905 334 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 INPP5KQ9BT40 448 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 EFCAB11Q9BUY7 163 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 NELFAQ9H3P2 528 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 CTDSP2O14595 271 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SHMT2P34897 504 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 AANATQ16613 207 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 NLRP8Q86W28 1048 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 TMPRSS12Q86WS5 348 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 MRPL41Q8IXM3 137 aaKnown RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 SLC5A8Q8N695 610 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 OR10H5Q8NGA6 315 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 OR9Q2Q8NGE9 314 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 ARMC5Q96C12 935 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 MRPS30Q9NP92 439 aaKnown RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 MKKSQ9NPJ1 570 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 FAM198AQ9UFP1 575 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 PGAP2Q9UHJ9 254 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF705GA8MUZ8 300 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 AOC2O75106 756 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 UBL3O95164 117 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 GLUD1P00367 558 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 HOXB1P14653 301 aaPredicted RBP6.71□□□□□ -1.34
SMC1A-201ENST00000322213 GPR162Q16538 588 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 PAGE3Q5JUK9 113 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 RASGEF1AQ8N9B8 481 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 DTX3Q8N9I9 347 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 OR2L8Q8NGY9 312 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 NEK7Q8TDX7 302 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 GRHL3Q8TE85 626 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 MRGPRX2Q96LB1 330 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 C20orf27Q9GZN8 174 aa6.71□□□□□ -1.34
SMC1A-201ENST00000322213 ADAMTS9Q9P2N4 1935 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 FADS1O60427 444 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RPP14O95059 124 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 LMO2P25791 158 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 KCNC1P48547 511 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 TSSK4Q6SA08 328 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF704Q6ZNC4 412 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 FAM122BQ7Z309 247 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 TAC4Q86UU9 113 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ADGRF3Q8IZF5 1079 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 DYNC2LI1Q8TCX1 351 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 BRIX1Q8TDN6 353 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 OR2M4Q96R27 311 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 TRAF4Q9BUZ4 470 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CEP192Q8TEP8 1941 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 SMIM35A0A1B0GVV1 85 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 SLC6A6P31641 620 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 PSPHP78330 225 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CRTC1Q6UUV9 634 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RHOUQ7L0Q8 258 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 BBS10Q8TAM1 723 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CASTOR1Q8WTX7 329 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ISL2Q96A47 359 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 IMP4Q96G21 291 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 RXFP3Q9NSD7 469 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 MRPS33Q9Y291 106 aaKnown RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 COLEC10Q9Y6Z7 277 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CUL9Q8IWT3 2517 aa6.7□□□□□ -1.34
SMC1A-201ENST00000322213 ELOA3DA6NLF2 546 aaPredicted RBP6.7□□□□□ -1.34
SMC1A-201ENST00000322213 CYTIPO60759 359 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms