RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 EVLQ9UI08 416 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ATG4BQ9Y4P1 393 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 H3BRB1 525 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SMAD6O43541 496 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 C22orf31O95567 290 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 APBA3O96018 575 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 GOT2P00505 430 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 MPC1LP0DKB6 136 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CSF2RAP15509 400 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 DDCP20711 480 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 FRKP42685 505 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SELENOWP63302 87 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CAMK2BQ13554 666 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 GRIN2CQ14957 1233 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 GTDC1Q4AE62 458 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CELF3Q5SZQ8 465 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 FAM162BQ5T6X4 162 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM236Q5W0B7 351 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 C16orf59Q7L2K0 433 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SFXN5Q8TD22 340 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 RSC1A1Q92681 617 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ACTRT3Q9BYD9 372 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TMPRSS5Q9H3S3 457 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TUT1Q9H6E5 874 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SLC17A5Q9NRA2 495 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SACM1LQ9NTJ5 587 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ERVK13-1Q9NX77 482 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CBLCQ9ULV8 474 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CLEC4AQ9UMR7 237 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TVP23AA6NH52 213 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 GABARAPH6UMI1 98 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CBX4O00257 560 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 B4GAT1O43505 415 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 USP17L7P0C7H9 530 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 EVI2BP34910 448 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 DLSTP36957 453 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OR3A2P47893 321 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SLC10A7Q0GE19 358 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 EFEMP1Q12805 493 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 BTN1A1Q13410 526 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 PGBD2Q6P3X8 592 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 KCNIP4Q6PIL6 250 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 MRPL10Q7Z7H8 261 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 DCUN1D3Q8IWE4 304 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 C10orf53Q8N6V4 93 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OR1J1Q8NGS3 322 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 JOSD2Q8TAC2 188 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF516Q92618 1163 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 GGHQ92820 318 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ARMC5Q96C12 935 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 YIPF6Q96EC8 236 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 HBEGFQ99075 208 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SLC30A3Q99726 388 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ATG5Q9H1Y0 275 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OR52A5Q9H2C5 316 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CLMPQ9H6B4 373 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM38AQ9H6F2 299 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 MKKSQ9NPJ1 570 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 POLE4Q9NR33 117 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 COPS3Q9UNS2 423 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 V9GYS6 101 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 C7orf72A4D263 438 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TTLL8A6PVC2 850 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 RFXAPO00287 272 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 FFAR3O14843 346 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 GPR42O15529 346 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 MSCO60682 206 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 KCNJ13O60928 360 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 RECQL4O94761 1208 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 UBXN7O94888 489 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 LCKP06239 509 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ADORA3P0DMS8 318 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 RBMXP38159 391 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 MEOX2P50222 304 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 PPP1R8Q12972 351 aaKnown RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ABRAXAS2Q15018 415 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM35AQ53FP2 167 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 IFNLR1Q8IU57 520 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OR9I1Q8NGQ6 314 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SCMH1Q96GD3 660 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 LRIG1Q96JA1 1093 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TSSK3Q96PN8 268 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SLC38A3Q99624 504 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TEX101Q9BY14 249 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 ULBP1Q9BZM6 244 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CIPCQ9C0C6 399 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 SEMA4GQ9NTN9 838 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 OR5K3A6NET4 321 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 RNF212BA8MTL3 300 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 H7C417 338 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 PCDH7O60245 1069 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 HTR1AP08908 422 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 PFKLP17858 780 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 HTR2CP28335 458 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 DNASE1L1P49184 302 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 CCR8P51685 355 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM115Q12893 351 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-201ENST00000317147 DHCR24Q15392 516 aa4.29□□□□□ -1.72
CNOT1-201ENST00000317147 PAN2Q504Q3 1202 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms