RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SP9P0CG40 484 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ARSBP15848 533 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 RACK1P63244 317 aaKnown RBP7.28□□□□□ -1.24
CNOT4-201ENST00000315544 CDK6Q00534 326 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 RAB40BQ12829 278 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 IL10RAQ13651 578 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 KLF9Q13886 244 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-201ENST00000315544 SYPL1Q16563 259 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 DECR1Q16698 335 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 IFI44LQ53G44 452 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 KLHL26Q53HC5 615 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ATAT1Q5SQI0 421 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ANXA8L1Q5VT79 327 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 Q6ZSR3 168 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 AHSA2Q719I0 299 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 OR52N1Q8NH53 320 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 LILRB4Q8NHJ6 448 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 SLC5A11Q8WWX8 675 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 RMDN1Q96DB5 314 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 PRRC1Q96M27 445 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 PANX1Q96RD7 426 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 IRF2BPLQ9H1B7 796 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ASB6Q9NWX5 421 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 TRPM5Q9NZQ8 1165 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 CFAP97Q9P2B7 532 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 IL36AQ9UHA7 158 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 STON1Q9Y6Q2 735 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 V9GYQ6 96 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 A0A1W2PRB8 838 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 OR2M5A3KFT3 312 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 LRATO95237 230 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 TYRP14679 529 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 SERPINA4P29622 427 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 GIPRP48546 466 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 COX10Q12887 443 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 MAPK14Q16539 360 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 PAGE2BQ5JRK9 111 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 DGAT2L6Q6ZPD8 337 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 TMPRSS11FQ6ZWK6 438 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ADCK2Q7Z695 626 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 POLR2J2Q9GZM3 115 aaKnown RBP7.28□□□□□ -1.24
CNOT4-201ENST00000315544 POLR2J3Q9H1A7 115 aaKnown RBP7.28□□□□□ -1.24
CNOT4-201ENST00000315544 MED17Q9NVC6 651 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ARL15Q9NXU5 204 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 CD84Q9UIB8 345 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF229Q9UJW7 825 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 IGKV1D-42A0A075B6H8 117 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 PRR23AA6NEV1 266 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ETV2O00321 342 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-201ENST00000315544 GSTA4O15217 222 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 HCRTR1O43613 425 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 AIREO43918 545 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ALX3O95076 343 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 MPC2O95563 127 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 IGKV1D-16P01601 117 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 CPN2P22792 545 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 PRKAR1BP31321 381 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 NTHL1P78549 312 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 GPLD1P80108 840 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 SYT16Q17RD7 645 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 REEP3Q6NUK4 255 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 SLC48A1Q6P1K1 146 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 XKRXQ6PP77 449 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 PIP4P1Q86T03 277 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ZBTB46Q86UZ6 589 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 GLCCI1Q86VQ1 547 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 RYBPQ8N488 228 aaPredicted RBP7.28□□□□□ -1.24
CNOT4-201ENST00000315544 LSMEM1Q8N8F7 131 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 C11orf65Q8NCR3 313 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 BBS1Q8NFJ9 593 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 CXorf40AQ8TE69 158 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 PPWD1Q96BP3 646 aaKnown RBP7.28□□□□□ -1.24
CNOT4-201ENST00000315544 SORCS2Q96PQ0 1159 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 OR2A5Q96R48 311 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 SEMA6CQ9H3T2 930 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 TDP1Q9NUW8 608 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 ANAPC10Q9UM13 185 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 MAPRE3Q9UPY8 281 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 POLHQ9Y253 713 aa7.28□□□□□ -1.24
CNOT4-201ENST00000315544 E9PI62 339 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 LDLRAD4O15165 306 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 PGRMC2O15173 223 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 VEGFDO43915 354 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 CHEK2O96017 543 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 TYRP1P17643 537 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 LSSP48449 732 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 TARDBPQ13148 414 aaKnown RBP eCLIP7.27□□□□□ -1.253e-8■■■■■ 33.2
CNOT4-201ENST00000315544 DGUOKQ16854 277 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 HNRNPA1L2Q32P51 320 aaKnown RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ABHD17CQ6PCB6 329 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 HSDL2Q6YN16 418 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 C12orf76Q8N812 135 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 OR5AR1Q8NGP9 310 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 VANGL1Q8TAA9 524 aaPredicted RBP7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ASZ1Q8WWH4 475 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 RSC1A1Q92681 617 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 SLC25A38Q96DW6 304 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 EFCAB11Q9BUY7 163 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 BBS2Q9BXC9 721 aa7.27□□□□□ -1.25
CNOT4-201ENST00000315544 ATG10Q9H0Y0 220 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms