RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SEC61A1P61619 476 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 EMX2Q04743 252 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 NIPAL3Q6P499 406 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 OR9Q2Q8NGE9 314 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 TOMM40LQ969M1 308 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 NRSN2Q9GZP1 204 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 CARD8Q9Y2G2 431 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 CSNK1G3Q9Y6M4 447 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 SCAMP2O15127 329 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 GNB2P62879 340 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 FGL1Q08830 312 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 LRIF1Q5T3J3 769 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 MEX3BQ6ZN04 569 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 KLHDC9Q8NEP7 349 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ECHDC3Q96DC8 303 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 CDCA3Q99618 268 aaPredicted RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 ZDHHC18Q9NUE0 388 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 FAM120CQ9NX05 1096 aaKnown RBP7.38□□□□□ -1.23
SCN9A-201ENST00000303354 RDH8Q9NYR8 311 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 MEMO1Q9Y316 297 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 CMAHPQ9Y471 501 aa7.38□□□□□ -1.23
SCN9A-201ENST00000303354 METTL21EPA6NDL7 271 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 NDUFV2P19404 249 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 DLSTP36957 453 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 MELKQ14680 651 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 LTB4RQ15722 352 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 CCDC71Q8IV32 467 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF709Q8N972 641 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 DUSP23Q9BVJ7 150 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ITPAQ9BY32 194 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 PRSS16Q9NQE7 514 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 MED11Q9P086 117 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 AASSQ9UDR5 926 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 TNFSF15O95150 251 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SFRP4Q6FHJ7 346 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZDHHC14Q8IZN3 488 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 INO80EQ8NBZ0 244 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 PHOSPHO2Q8TCD6 241 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 OSTF1Q92882 214 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SIGLEC10Q96LC7 697 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ENKD1Q9H0I2 346 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 MBNL1Q9NR56 388 aaKnown RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 CRTAPO75718 401 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 TOXO94900 526 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 RAC2P15153 192 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SEC23BQ15437 767 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 OTPQ5XKR4 325 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 EPGNQ6UW88 154 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 BPHLQ86WA6 291 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 C8orf44Q96CB5 159 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SENP5Q96HI0 755 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 CUTCQ9NTM9 273 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 DECR2Q9NUI1 292 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZIM2Q9NZV7 527 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF175Q9Y473 711 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 C2CD4DB7Z1M9 353 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ANKRD28O15084 1053 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 GLO1Q04760 184 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 PIN1Q13526 163 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 TECRLQ5HYJ1 363 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 TCTE1Q5JU00 501 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 TRIM46Q7Z4K8 759 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 LILRA3Q8N6C8 439 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SPPL3Q8TCT6 385 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 S100A16Q96FQ6 103 aaKnown RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 IL26Q9NPH9 171 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 DKK3Q9UBP4 350 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 MCTS1Q9ULC4 181 aaKnown RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SYT7O43581 403 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SEC14L2O76054 403 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 MT-ND5P03915 603 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 INHBCP55103 352 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 CLDN17P56750 224 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 RPL11P62913 178 aaKnown RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 KCNC3Q14003 757 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 HES1Q14469 280 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 COMMD6Q7Z4G1 85 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 IQCKQ8N0W5 287 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 OR2I1PQ8NGU4 316 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 NXPE3Q969Y0 559 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 MAPKAP1Q9BPZ7 522 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 B3GNT2Q9NY97 397 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 PCDHGB1Q9Y5G3 927 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 HBQ1P09105 142 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 CTHP32929 405 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 GPR143P51810 404 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 PSD4Q8NDX1 1056 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 DEFB124Q8NES8 71 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 NELL2Q99435 816 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SLC25A18Q9H1K4 315 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM165Q9HC07 324 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 IGHV3-15A0A0B4J1V0 119 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 KLF11O14901 512 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 GRPP07492 148 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 PYCR1P32322 319 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 DPY19L1Q2PZI1 675 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SPNS2Q8IVW8 549 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ELP5Q8TE02 316 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 GLYATL2Q8WU03 294 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SLC6A16Q9GZN6 736 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 210.8 ms