RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 RPP38P78345 283 aaKnown RBP12.25□□□□□ -0.45
VPS28-201ENST00000292510 PRR5P85299 388 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 GUCY1A3Q02108 690 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 SRSF1Q07955 248 aaKnown RBP eCLIP12.25□□□□□ -0.45
VPS28-201ENST00000292510 LASP1Q14847 261 aaKnown RBP12.25□□□□□ -0.45
VPS28-201ENST00000292510 DUSP5Q16690 384 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 CYP27C1Q4G0S4 372 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 PDCD4Q53EL6 469 aaKnown RBP12.25□□□□□ -0.45
VPS28-201ENST00000292510 CMPK2Q5EBM0 449 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 MFSD12Q6NUT3 480 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 PAOXQ6QHF9 649 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 GALNT10Q86SR1 603 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 ARFGAP2Q8N6H7 521 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 TMEM251Q8N6I4 163 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 OR4A15Q8NGL6 344 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 OR9I1Q8NGQ6 314 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 RFWD2Q8NHY2 731 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 GPR151Q8TDV0 419 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 JADE3Q92613 823 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 SLC35A4Q96G79 324 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 SECISBP2Q96T21 854 aaKnown RBP12.25□□□□□ -0.45
VPS28-201ENST00000292510 ANGPTL4Q9BY76 406 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 GALNT9Q9HCQ5 603 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 NEUROD4Q9HD90 331 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 Q9N2J8 555 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 NPHS2Q9NP85 383 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 FLRT3Q9NZU0 649 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 DCTN4Q9UJW0 460 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 CBLCQ9ULV8 474 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 OSGIN2Q9Y236 505 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 HRH3Q9Y5N1 445 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 NUP214P35658 2090 aaPredicted RBP12.25□□□□□ -0.45
VPS28-201ENST00000292510 ZGRF1Q86YA3 2104 aa12.25□□□□□ -0.45
VPS28-201ENST00000292510 PRSS51A0A1B0GVH4 220 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 ANKRD33BA6NCL7 494 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 PRAMEF25A6NGN4 478 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 C17orf51A8MQB3 221 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 GNB5O14775 395 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 ICOSLGO75144 302 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 TRIM3O75382 744 aaPredicted RBP12.24□□□□□ -0.45
VPS28-201ENST00000292510 IGKV1D-16P01601 117 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 MAGEA5P43359 124 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 ZFP36L2P47974 494 aaKnown RBP12.24□□□□□ -0.45
VPS28-201ENST00000292510 RPS26P62854 115 aaKnown RBP12.24□□□□□ -0.45
VPS28-201ENST00000292510 GSTA3Q16772 222 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 DPY19L1Q2PZI1 675 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 TBCELQ5QJ74 424 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 EXOSC6Q5RKV6 272 aaKnown RBP12.24□□□□□ -0.45
VPS28-201ENST00000292510 HIVEP3Q5T1R4 2406 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 ANXA8L1Q5VT79 327 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 FNDC7Q5VTL7 733 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 SLC22A16Q86VW1 577 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 CDRT4Q8N9R6 151 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 OR56A1Q8NGH5 318 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 SFXN5Q8TD22 340 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 HOXB13Q92826 284 aaPredicted RBP12.24□□□□□ -0.45
VPS28-201ENST00000292510 TMCO6Q96DC7 493 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 CHMP6Q96FZ7 201 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 RMND5BQ96G75 393 aaPredicted RBP12.24□□□□□ -0.45
VPS28-201ENST00000292510 CCDC28BQ9BUN5 200 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 OSBPL11Q9BXB4 747 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 ZFP64Q9NPA5 681 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 SDR39U1Q9NRG7 319 aaPredicted RBP12.24□□□□□ -0.45
VPS28-201ENST00000292510 GPATCH2Q9NW75 528 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 KLRF1Q9NZS2 232 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 LIPGQ9Y5X9 500 aa12.24□□□□□ -0.45
VPS28-201ENST00000292510 NINQ8N4C6 2090 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 RNF103-CHMP3A0A140T963 221 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 ACOT7O00154 380 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 ABCB7O75027 752 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 SEMA7AO75326 666 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 SLC22A3O75751 556 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 IL33O95760 270 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 C1QCP02747 245 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 PGRP06401 933 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 ALOX5P09917 674 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 MASP1P48740 699 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 PRIM2P49643 509 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 PNLIPRP2P54317 469 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 CASP9P55211 416 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 PSPHP78330 225 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 MRPS22P82650 360 aaKnown RBP12.23□□□□□ -0.45
VPS28-201ENST00000292510 SF3A3Q12874 501 aaKnown RBP eCLIP12.23□□□□□ -0.453e-6■■■■□ 25.6
VPS28-201ENST00000292510 EFR3AQ14156 821 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 DECR1Q16698 335 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 VPS26BQ4G0F5 336 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 KRTCAP3Q53RY4 240 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 CCNJQ5T5M9 372 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 FIGNL1Q6PIW4 674 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 FGD2Q7Z6J4 655 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 ZAR1Q86SH2 424 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 CHERPQ8IWX8 916 aaKnown RBP12.23□□□□□ -0.45
VPS28-201ENST00000292510 GHDCQ8N2G8 530 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 COX18Q8N8Q8 333 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 CDS1Q92903 461 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 NTNG2Q96CW9 530 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 ZNF597Q96LX8 424 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 GNRHR2Q96P88 292 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 OR52E6Q96RD3 313 aa12.23□□□□□ -0.45
VPS28-201ENST00000292510 ZBTB18Q99592 522 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms