RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ZNF639Q9UID6 485 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PADI2Q9Y2J8 665 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PCDHGA6Q9Y5G7 932 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FAM25AB3EWG3 89 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FAM25CB3EWG5 89 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FAM25GB3EWG6 89 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SEC14L5O43304 696 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ASNA1O43681 348 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FGF17O60258 216 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 COQ9O75208 318 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 C6orf47O95873 294 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 B3GALT4O96024 378 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 HSD17B1P14061 328 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 XKP51811 444 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 BNIP2Q12982 314 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 RTP5Q14D33 572 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SAMD4BQ5PRF9 694 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ANKRD26P1Q6NSI1 321 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 METTL25Q8N6Q8 603 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 MIEF2Q96C03 454 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 CTHRC1Q96CG8 243 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 MRPL48Q96GC5 212 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 CNBD2Q96M20 576 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ANKRD27Q96NW4 1050 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 C19orf25Q9UFG5 118 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 LRCH1Q9Y2L9 728 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 CLDN16Q9Y5I7 305 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 DMDP11532 3685 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 OR6C76A6NM76 312 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 MEN1O00255 615 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 EMC8O43402 210 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SERPINB7O75635 380 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 RECKO95980 971 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 TAS2R41P59536 307 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PRR5P85299 388 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PRICKLE4Q2TBC4 344 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ZIK1Q3SY52 487 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SMARCD3Q6STE5 483 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 MSRB3Q8IXL7 192 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 GATSQ8NAP1 163 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 TMEM52Q8NDY8 209 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 GPR87Q9BY21 358 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 CHST8Q9H2A9 424 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC22A11Q9NSA0 550 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 DLL3Q9NYJ7 618 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 EGFL7Q9UHF1 273 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF451Q9Y4E5 1061 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PCDHB14Q9Y5E9 798 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 B3GALT1Q9Y5Z6 326 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 A0A1W2PNU3 283 aaPredicted RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 C9orf172C9J069 976 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 CASKO14936 926 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 PLOD3O60568 738 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 DNAJB6O75190 326 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 STK17BO94768 372 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 AGR2O95994 175 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 KRT8P05787 483 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 ZGLP1P0C6A0 271 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 CD1EP15812 388 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 MYL12AP19105 171 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 IFNGR2P38484 337 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 GMFBP60983 142 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 MAT1AQ00266 395 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 GPR68Q15743 365 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 ERICH5Q6P6B1 374 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 TMEM205Q6UW68 189 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 OFCC1Q8IZS5 231 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 OR52N2Q8NGI0 321 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 DGAT2Q96PD7 388 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 INPP5KQ9BT40 448 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 CD300AQ9UGN4 299 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 ACAD8Q9UKU7 415 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 TERTO14746 1132 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 GSC2O15499 205 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 HEXBP07686 556 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF28P17035 718 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 HBA1P69905 142 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 SRYQ05066 204 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 TRAP1Q12931 704 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF267Q14586 743 aaPredicted RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 ELAVL1Q15717 326 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 NKG7Q16617 165 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 PIGGQ5H8A4 983 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 CALHM3Q86XJ0 350 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 MORN4Q8NDC4 146 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC45A3Q96JT2 553 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 MS4A4EQ96PG1 132 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 CENPMQ9NSP4 180 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC25A37Q9NYZ2 338 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 C19orf53Q9UNZ5 99 aaPredicted RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 NINQ8N4C6 2090 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 LOC102723996A0A087X1L8 192 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 H3BSH0 61 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 PSMD9O00233 223 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 BRINP1O60477 761 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 DEAF1O75398 565 aaPredicted RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 PRKRAO75569 313 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 BMP2P12643 396 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 HOXB6P17509 224 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 GPX2P18283 190 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms