RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PRICKLE2Q7Z3G6 844 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 C6orf120Q7Z4R8 191 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ZNF366Q8N895 744 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 TCEANCQ8N8B7 351 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 OR4D11Q8NGI4 311 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 UCN3Q969E3 161 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 VWCEQ96DN2 955 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SORCS2Q96PQ0 1159 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SPATA5L1Q9BVQ7 753 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 TMEM121BQ9BXQ6 578 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 PCBD2Q9H0N5 130 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 PPA2Q9H2U2 334 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ANKRD19PQ9H560 264 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 RERGLQ9H628 205 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 HEXA-AS1Q9H8Q6 139 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SPHK2Q9NRA0 654 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SEMA3GQ9NS98 782 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 MAN2C1Q9NTJ4 1040 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 EVA1BQ9NVM1 165 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 TRDV1A0A1B0GX56 115 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 FAM227AF5H4B4 570 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 NRG2O14511 850 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 PRODHO43272 600 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 TGM5O43548 720 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 VEGFDO43915 354 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 PRKYO43930 277 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 B4GALT2O60909 372 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SH3BGRLO75368 114 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 GBAP04062 536 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ENPP1P22413 925 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 KELP23276 732 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 GIPRP48546 466 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SMSP52788 366 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ATP12AP54707 1039 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 REEP5Q00765 189 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 RPS26P11Q5JNZ5 115 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 ATAT1Q5SQI0 421 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ZNF57Q68EA5 555 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 TRILQ7L0X0 811 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 RTL10Q7L3V2 364 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 C16orf62Q7Z3J2 963 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 PRSS42Q7Z5A4 293 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 GJD3Q8N144 294 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SFXN5Q8TD22 340 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 TM9SF4Q92544 642 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 PRRC1Q96M27 445 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ZDHHC5Q9C0B5 715 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ZBP1Q9H171 429 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 OR52A5Q9H2C5 316 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ZFP64Q9NPA5 681 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ADAM30Q9UKF2 790 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 RWDD3Q9Y3V2 267 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 MYOFQ9NZM1 2061 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 A0A0A6YYJ9 748 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 RPS10-NUDT3A0A1W2PQS6 291 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 CIB4A0PJX0 185 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SMIM30A4D0T7 59 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 CASKO14936 926 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SPINT1O43278 529 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 NR2F6P10588 404 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 TYRP14679 529 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 PPM1AP35813 382 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 FEN1P39748 380 aaKnown RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 PBX2P40425 430 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ETV5P41161 510 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ETV1P50549 477 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 DGKEP52429 567 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 RPS25P62851 125 aaKnown RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 SNTA1Q13424 505 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 POU4F3Q15319 338 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 MZT2AQ6P582 158 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 PODNL1Q6PEZ8 512 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SLC36A4Q6YBV0 504 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ANKRD33Q7Z3H0 272 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 WDR53Q7Z5U6 358 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 ADGRG3Q86Y34 549 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 ZNF578Q96N58 590 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 TREX2Q9BQ50 279 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 ANHXE9PGG2 379 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 NEDD8-MDP1E9PL57 170 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 ATP6V1G2-DDX39BF2Z307 99 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 SAP18O00422 153 aaKnown RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 NME6O75414 186 aaPredicted RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 DHFRP00374 187 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 RRASP10301 218 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 DRD2P14416 443 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 XPAP23025 273 aaPredicted RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 STOMP27105 288 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 SLC6A1P30531 599 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 NNMTP40261 264 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 AGFG1P52594 562 aaKnown RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 MANFP55145 182 aaKnown RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 CTAG1AP78358 180 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 ADAM15Q13444 863 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 GNA13Q14344 377 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 GARNL3Q5VVW2 1013 aa9.75□□□□□ -0.85
SKA1-201ENST00000285116 FBXO46Q6PJ61 603 aaPredicted RBP9.75□□□□□ -0.85
SKA1-201ENST00000285116 LUZP2Q86TE4 346 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms