RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 HTR3EA5X5Y0 456 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 SLC9B1P1A6NJY1 282 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 H0YIV9 168 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 IL33O95760 270 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 RLN2P04090 185 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 CPOXP36551 454 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 NUDT1P36639 197 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 HBA1P69905 142 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ANKRD33Q7Z3H0 272 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 CPNE2Q96FN4 548 aaPredicted RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 UHRF1Q96T88 793 aaPredicted RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 MED11Q9P086 117 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 KCMF1Q9P0J7 381 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 NME7Q9Y5B8 376 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 HMX2A2RU54 273 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ZNF701M0R085 212 aaPredicted RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 LDB3O75112 727 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 VAMP1P23763 118 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 MRPS21P82921 87 aaKnown RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 SELPLGQ14242 412 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 RPE65Q16518 533 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 SLC5A12Q1EHB4 618 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 Q6ZSR9 355 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 SHFQ7M4L6 423 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 TMED4Q7Z7H5 227 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 MCATQ8IVS2 390 aaKnown RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 WDR20Q8TBZ3 569 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 DIO2Q92813 273 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 DPH1Q9BZG8 443 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 SLC7A7Q9UM01 511 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 PADI2Q9Y2J8 665 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ISPDA4D126 451 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ARNTP27540 789 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 STT3AP46977 705 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ACY1Q03154 408 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 NFATC3Q12968 1075 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 APOFQ13790 326 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 KEAP1Q14145 624 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 ZNF791Q3KP31 576 aaPredicted RBP13.22□□□□□ -0.29
CDH3-201ENST00000264012 PGM2L1Q6PCE3 622 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 MAVSQ7Z434 540 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 MSLNLQ96KJ4 702 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 SCGB3A2Q96PL1 93 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 NAALAD2Q9Y3Q0 740 aa13.22□□□□□ -0.29
CDH3-201ENST00000264012 S100A9P06702 114 aaKnown RBP13.21□□□□□ -0.29
CDH3-201ENST00000264012 AP2S1P53680 142 aaPredicted RBP13.21□□□□□ -0.29
CDH3-201ENST00000264012 TAP2Q03519 686 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 MAP4K2Q12851 820 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 CCINQ13939 588 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 RAET1LQ5VY80 246 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 LRFN4Q6PJG9 635 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 CBLL1Q75N03 491 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 MAMDC2Q7Z304 686 aaPredicted RBP13.21□□□□□ -0.29
CDH3-201ENST00000264012 ZNF619Q8N2I2 560 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 METTL4Q8N3J2 472 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 OR2T4Q8NH00 348 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 OR2T11Q8NH01 316 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 UBTD2Q8WUN7 234 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 NPLQ9BXD5 320 aaPredicted RBP13.21□□□□□ -0.29
CDH3-201ENST00000264012 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDH3-201ENST00000264012 NUMBLQ9Y6R0 609 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 C17orf105B2RV13 164 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 FOXE1O00358 373 aaPredicted RBP13.21□□□□□ -0.29
CDH3-201ENST00000264012 FMO6PO60774 539 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 LCKP06239 509 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 TFPTP0C1Z6 253 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 CARD17Q5XLA6 110 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 ZC3H14Q6PJT7 736 aaKnown RBP13.21□□□□□ -0.29
CDH3-201ENST00000264012 ANKK1Q8NFD2 765 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 EVPLQ92817 2033 aa13.21□□□□□ -0.29
CDH3-201ENST00000264012 LOC100509620A0A075B734 347 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 UBFD1O14562 309 aaKnown RBP13.21□□□□□ -0.3
CDH3-201ENST00000264012 CLUP10909 449 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 TNFRSF4P43489 277 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 NR0B1P51843 470 aaKnown RBP13.21□□□□□ -0.3
CDH3-201ENST00000264012 GNG2P59768 71 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 LRIF1Q5T3J3 769 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 SYCE2Q6PIF2 218 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 RFT1Q96AA3 541 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 TMIGD2Q96BF3 282 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 BMFQ96LC9 184 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 HHATLQ9HCP6 504 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 PLEKHA6Q9Y2H5 1048 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 AP1M2Q9Y6Q5 423 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 CTXN1P60606 82 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 MAB21L1Q13394 359 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 BORAQ6PGQ7 559 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 NXPE2Q96DL1 559 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 KLHL21Q9UJP4 597 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 CLEC4EQ9ULY5 219 aa13.21□□□□□ -0.3
CDH3-201ENST00000264012 SYNGR4O95473 234 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 IGLV3-25P01717 112 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 IRS1P35568 1242 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 AHRP35869 848 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 XCR1P46094 333 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 ZNF84P51523 738 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 MRPL58Q14197 206 aaKnown RBP13.2□□□□□ -0.3
CDH3-201ENST00000264012 MBTPS1Q14703 1052 aa13.2□□□□□ -0.3
CDH3-201ENST00000264012 LEG1Q6P5S2 330 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms