RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SPG21Q9NZD8 308 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 SLC23A2Q9UGH3 650 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 SCML1Q9UN30 329 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 IRAK3Q9Y616 596 aa12.21□□□□□ -0.45
SNX1-201ENST00000261889 MN1Q10571 1320 aaPredicted RBP12.21□□□□□ -0.46
SNX1-201ENST00000261889 LEUTXA8MZ59 168 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 MRPS14O60783 128 aaKnown RBP12.21□□□□□ -0.46
SNX1-201ENST00000261889 POP7O75817 140 aaKnown RBP12.21□□□□□ -0.46
SNX1-201ENST00000261889 POP4O95707 220 aaKnown RBP12.21□□□□□ -0.46
SNX1-201ENST00000261889 ATF4P18848 351 aaPredicted RBP12.21□□□□□ -0.46
SNX1-201ENST00000261889 SFRP4Q6FHJ7 346 aaPredicted RBP12.21□□□□□ -0.46
SNX1-201ENST00000261889 FAM92BQ6ZTR7 304 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 OR10H4Q8NGA5 316 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 OR11H7Q8NGC8 314 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 OR8K5Q8NH50 307 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 ZNF431Q8TF32 576 aaPredicted RBP12.21□□□□□ -0.46
SNX1-201ENST00000261889 BTN2A2Q8WVV5 523 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 FCRL1Q96LA6 429 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 ZSCAN5AQ9BUG6 496 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 RBFOX1Q9NWB1 397 aaKnown RBP12.21□□□□□ -0.46
SNX1-201ENST00000261889 ING3Q9NXR8 418 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 STMN3Q9NZ72 180 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 SLC25A13Q9UJS0 675 aa12.21□□□□□ -0.46
SNX1-201ENST00000261889 IQCMA0A1B0GVH7 501 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 CFDP00746 253 aaPredicted RBP12.2□□□□□ -0.46
SNX1-201ENST00000261889 WASP42768 502 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 RRAS2P62070 204 aaPredicted RBP12.2□□□□□ -0.46
SNX1-201ENST00000261889 CPOQ8IVL8 374 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 NRMQ8IXM6 262 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 TMEFF1Q8IYR6 380 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 CBARPQ8N350 705 aaPredicted RBP12.2□□□□□ -0.46
SNX1-201ENST00000261889 RFLNBQ8N5W9 214 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 PLA2G15Q8NCC3 412 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 OR56A3Q8NH54 315 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 TMEM255BQ8WV15 326 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 RIT1Q92963 219 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 RIPOR3Q96MK2 946 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 ZNF559Q9BR84 538 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 FAIM2Q9BWQ8 316 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 GPR174Q9BXC1 333 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 MS4A7Q9GZW8 240 aaPredicted RBP12.2□□□□□ -0.46
SNX1-201ENST00000261889 ENAMQ9NRM1 1142 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 SEMA4GQ9NTN9 838 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 RASD1Q9Y272 281 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 RTTNQ86VV8 2226 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 A0A087WV48 116 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 A0A1W2PRG6 482 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 RGS11O94810 467 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 TIMP1P01033 207 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 HMGN2P05204 90 aaKnown RBP12.2□□□□□ -0.46
SNX1-201ENST00000261889 CLTBP09497 229 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 GKN3PP0CG01 181 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 GIFP27352 417 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 ZNF628Q5EBL2 1059 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 TJAP1Q5JTD0 557 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 C12orf73Q69YU5 71 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 HIST2H2AA3Q6FI13 130 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 NXPE4Q6UWF7 544 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 Q6ZNB5 142 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 MSANTD1Q6ZTZ1 278 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 ARL14Q8N4G2 192 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 OR4Q3Q8NH05 313 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 TEX47Q8TBZ9 253 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 GANCQ8TET4 914 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
SNX1-201ENST00000261889 NANSQ9NR45 359 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 DSPPQ9NZW4 1301 aa12.2□□□□□ -0.46
SNX1-201ENST00000261889 LOC105371267A0A1B0GV96 52 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 MPC1LP0DKB6 136 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 CTSAP10619 480 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 SLC1A3P43003 542 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 E2F1Q01094 437 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 PRAMEF14Q5SWL7 426 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 PRAMEF13Q5VWM6 474 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 C18orf63Q68DL7 685 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 ZNF547Q8IVP9 402 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 CPA6Q8N4T0 437 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 TMEM99Q8N816 258 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 UXS1Q8NBZ7 420 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 SETD6Q8TBK2 473 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 APOBEC4Q8WW27 367 aaKnown RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 SMPDL3AQ92484 453 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 TM4SF18Q96CE8 201 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 ABHD1Q96SE0 405 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 TMEM38AQ9H6F2 299 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 PPP1R3EQ9H7J1 279 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 SIRT3Q9NTG7 399 aaPredicted RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 ATG2AQ2TAZ0 1938 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 PLXNB3Q9ULL4 1909 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 EFEMP2O95967 443 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 ALPPP05187 535 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 GPR1P46091 355 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 ARHGDIBP52566 201 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 CLDN12P56749 244 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 SLC9B2Q86UD5 537 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 ZNF655Q8N720 491 aaPredicted RBP12.19□□□□□ -0.46
SNX1-201ENST00000261889 ZNF614Q8N883 585 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 LRRC20Q8TCA0 184 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 HSD17B8Q92506 261 aa12.19□□□□□ -0.46
SNX1-201ENST00000261889 PDXPQ96GD0 296 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms