RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DAPL1A0PJW8 107 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 PGRMC2O15173 223 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 HLA-DPB1P04440 258 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 PRG2P13727 222 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 GIFP27352 417 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 TRIM23P36406 574 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 CCR2P41597 374 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 GZMKP49863 264 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 HCCSP53701 268 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 SMIM11AP58511 58 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 ASAH1Q13510 395 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 LTB4RQ15722 352 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 NTRK2Q16620 822 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 PLK5Q496M5 336 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 YIF1BQ5BJH7 314 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 KHDRBS2Q5VWX1 349 aaKnown RBP11.26□□□□□ -0.61
USHBP1-201ENST00000252597 MEDAGQ5VYS4 303 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
USHBP1-201ENST00000252597 TRAM1L1Q8N609 369 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 NATD1Q8N6N6 113 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 GRHL3Q8TE85 626 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 PXYLP1Q8TE99 480 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 TM4SF18Q96CE8 201 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 TIFAQ96CG3 184 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 SLC28A3Q9HAS3 691 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 ENTPD4Q9Y227 616 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 GPR55Q9Y2T6 319 aaPredicted RBP11.26□□□□□ -0.61
USHBP1-201ENST00000252597 PCYT1BQ9Y5K3 369 aaPredicted RBP11.26□□□□□ -0.61
USHBP1-201ENST00000252597 VWA8A3KMH1 1905 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 OR52A4PA6NMU1 304 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 PRR23D1E9PI22 279 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 RECKO95980 971 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 PRR23D2P0DMB1 279 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 DDCP20711 480 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 SLC1A3P43003 542 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 CDKL4Q5MAI5 379 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 C18orf63Q68DL7 685 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 OR8D4Q8NGM9 314 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 OR5P2Q8WZ92 322 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 IRF7Q92985 503 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 PDXPQ96GD0 296 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 MKRN2Q9H000 416 aaKnown RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 SLC25A19Q9HC21 320 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 MYNNQ9NPC7 610 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 ZC4H2Q9NQZ6 224 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 FCMRO60667 390 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 DHFRP00374 187 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 CLTBP09497 229 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 PSMA3P25788 255 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 MAT2AP31153 395 aaKnown RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 MC3RP41968 323 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 KCNJ5P48544 419 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 PPP3R1P63098 170 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 DEFB103AP81534 67 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 TGM3Q08188 693 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 MESP2Q0VG99 397 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 ADAM15Q13444 863 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 KCNC3Q14003 757 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 GPNMBQ14956 572 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 TCEAL5Q5H9L2 206 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 MLIPQ5VWP3 458 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 CEACAM19Q7Z692 300 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 FAM109AQ8N4B1 249 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 KLHL36Q8N4N3 616 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 ANKRD53Q8N9V6 530 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 CEP76Q8TAP6 659 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 OVCA2Q8WZ82 227 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 THAP7Q9BT49 309 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 DPH1Q9BZG8 443 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 CLEC4MQ9H2X3 399 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 KLHL31Q9H511 634 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 ADAP2Q9NPF8 381 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 A4GNTQ9UNA3 340 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 SLC5A10A0PJK1 596 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 CHURC1-FNTBB4DL54 471 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 NDUFS4O43181 175 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 PRODHO43272 600 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 GMFGO60234 142 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 LCMT2O60294 686 aaKnown RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 MT-ND4P03905 459 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 GRPRP30550 384 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 PYCR1P32322 319 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 RRAS2P62070 204 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 OC90Q02509 493 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 ODF4Q2M2E3 257 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 GLYR1Q49A26 553 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 C6orf132Q5T0Z8 1188 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 ZC3H14Q6PJT7 736 aaKnown RBP11.25□□□□□ -0.61
USHBP1-201ENST00000252597 AMZ2Q86W34 360 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 NUDT13Q86X67 352 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 OR4M1Q8NGD0 313 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 GLIPR2Q9H4G4 154 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 SLC23A2Q9UGH3 650 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 SATB2Q9UPW6 733 aa11.25□□□□□ -0.61
USHBP1-201ENST00000252597 NLRC5Q86WI3 1866 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 IGLV3-16A0A075B6K0 115 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 AGAP14A8MT82 685 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 AKAP8O43823 692 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 CHRM4P08173 479 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 LIMS3P0CW19 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms