RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 LRIF1Q5T3J3 769 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 CBLL1Q75N03 491 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 RAB11FIP2Q7L804 512 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 SHFQ7M4L6 423 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 TSEN54Q7Z6J9 526 aaKnown RBP18.71■□□□□ 0.59
HOXC13-201ENST00000243056 ZER1Q7Z7L7 766 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 EDARADDQ8WWZ3 215 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 TM9SF4Q92544 642 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 ELSPBP1Q96BH3 223 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 KCTD7Q96MP8 289 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 GAS2L1Q99501 681 aaPredicted RBP18.71■□□□□ 0.59
HOXC13-201ENST00000243056 ZNF251Q9BRH9 671 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 ABCG8Q9H221 673 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 FKBPLQ9UIM3 349 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 RPS6KA6Q9UK32 745 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 SLC6A5Q9Y345 797 aa18.71■□□□□ 0.59
HOXC13-201ENST00000243056 TCF20Q9UGU0 1960 aaKnown RBP18.71■□□□□ 0.59
HOXC13-201ENST00000243056 ANXA2P2A6NMY6 339 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 TTLL8A6PVC2 850 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 KCNJ3P48549 501 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 PDGFRLQ15198 375 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 PAQR3Q6TCH7 311 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 ZNF454Q8N9F8 522 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 C10orf90Q96M02 699 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 ZNF382Q96SR6 550 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 ABCG5Q9H222 651 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 MFSD1Q9H3U5 465 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 POFUT2Q9Y2G5 429 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 TNFRSF11BO00300 401 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 ENTPD6O75354 484 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 NCR1O76036 304 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 PIPP12273 146 aaPredicted RBP18.7■□□□□ 0.58
HOXC13-201ENST00000243056 RBBP4Q09028 425 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 MLLT11Q13015 90 aaPredicted RBP18.7■□□□□ 0.58
HOXC13-201ENST00000243056 ZNF234Q14588 700 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 TSC22D1Q15714 1073 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 SPIN4Q56A73 249 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 FAM198BQ6UWH4 519 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 SUSD1Q6UWL2 747 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 OR52J3Q8NH60 311 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 OR1S1Q8NH92 325 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 SUSD6Q92537 303 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 CDKN2AIPNLQ96HQ2 116 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 ATF6BQ99941 703 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 MED18Q9BUE0 208 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 SUV39H2Q9H5I1 410 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 DNAJC11Q9NVH1 559 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 CCL27Q9Y4X3 112 aa18.7■□□□□ 0.58
HOXC13-201ENST00000243056 BPIP17213 487 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 MAZP56270 477 aaKnown RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 HTR4Q13639 388 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 PTCHD4Q6ZW05 846 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 STK40Q8N2I9 435 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 C1orf52Q8N6N3 182 aaKnown RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 CNOT9Q92600 299 aaKnown RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 ARL5BQ96KC2 179 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 CDX2Q99626 313 aaPredicted RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 CMSS1Q9BQ75 279 aaKnown RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 CLN6Q9NWW5 311 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 OBP2AQ9NY56 170 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 MKL2Q9ULH7 1088 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 SLC27A6Q9Y2P4 619 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 EFCAB7A8K855 629 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 KAT7O95251 611 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 SIX6O95475 246 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 SERPINA4P29622 427 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 ZNF140P52738 457 aaPredicted RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 RPS25P62851 125 aaKnown RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 PTGES3Q15185 160 aaKnown RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 PIANPQ8IYJ0 282 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 EIF4E3Q8N5X7 224 aaKnown RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 NANOGP1Q8N7R0 232 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 OR1M1Q8NGA1 313 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 OR9Q2Q8NGE9 314 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 C2CD4CQ8TF44 421 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 ELMOD3Q96FG2 381 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 KCNH6Q9H252 994 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 METTL17Q9H7H0 456 aaPredicted RBP18.69■□□□□ 0.58
HOXC13-201ENST00000243056 SLC25A19Q9HC21 320 aa18.69■□□□□ 0.58
HOXC13-201ENST00000243056 CASC3O15234 703 aaKnown RBP18.68■□□□□ 0.58
HOXC13-201ENST00000243056 NARSO43776 548 aaKnown RBP18.68■□□□□ 0.58
HOXC13-201ENST00000243056 KLK8O60259 260 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 HIST1H2AGP0C0S8 130 aaPredicted RBP18.68■□□□□ 0.58
HOXC13-201ENST00000243056 HIST1H2ADP20671 130 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 PTBP1P26599 531 aaKnown RBP eCLIP18.68■□□□□ 0.58
HOXC13-201ENST00000243056 DGKEP52429 567 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 KCNJ10P78508 379 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 TFF2Q03403 129 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 PUM1Q14671 1186 aaKnown RBP eCLIP18.68■□□□□ 0.58
HOXC13-201ENST00000243056 NTRK2Q16620 822 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 HIST2H2AA3Q6FI13 130 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 LAS2Q8IYD9 372 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 HIST1H2AHQ96KK5 128 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 HIST1H2AJQ99878 128 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 DPH2Q9BQC3 489 aaPredicted RBP18.68■□□□□ 0.58
HOXC13-201ENST00000243056 DNTTIP1Q9H147 329 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 EQTNQ9NQ60 294 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 SNX11Q9Y5W9 270 aa18.68■□□□□ 0.58
HOXC13-201ENST00000243056 POP4O95707 220 aaKnown RBP18.68■□□□□ 0.58
HOXC13-201ENST00000243056 TRBC1P01850 177 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms