RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 GDE1Q9NZC3 331 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 PCYT1BQ9Y5K3 369 aaPredicted RBP14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 ARID1BQ8NFD5 2236 aaPredicted RBP14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 CHRM4P08173 479 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 MRPL3P09001 348 aaKnown RBP14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 HMGA2P52926 109 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 CSTF1Q05048 431 aaKnown RBP14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 B3GLCTQ6Y288 498 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 ABHD13Q7L211 337 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 NRARPQ7Z6K4 114 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 LINC01555Q8NAE3 123 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 OR4F15Q8NGB8 312 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 CDS1Q92903 461 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 OPALINQ96PE5 141 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 TIMM29Q9BSF4 260 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 POLDIP3Q9BY77 421 aaKnown RBP14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 A3GALT2U3KPV4 340 aa14.06□□□□□ -0.16
UBE2D4-201ENST00000222402 NPIPA5A0A0B4J1W7 369 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 OR6C74A6NCV1 312 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 A8MVJ9 347 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 NPIPA7E9PJI5 369 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 FFAR1O14842 300 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 LILRB5O75023 590 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 KLF8O95600 359 aaPredicted RBP14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 CLEC2LP0C7M8 214 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 NPIPA8P0DM63 369 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 TGM1P22735 817 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 KCNJ8Q15842 424 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 SYT14P1Q58G82 188 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 CPOQ8IVL8 374 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 ZNF582Q96NG8 517 aaPredicted RBP14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 NDEL1Q9GZM8 345 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 LMAN2LQ9H0V9 348 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 KCNN2Q9H2S1 579 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 A0A1W2PRQ8 180 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 PRAMEF25A6NGN4 478 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 NDUFV2P19404 249 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 CD83Q01151 205 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 SLC3A1Q07837 685 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 FBXO46Q6PJ61 603 aaPredicted RBP14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 ETFBKMTQ8IXQ9 262 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 DTX3Q8N9I9 347 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 OR52I1Q8NGK6 324 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 MS4A6EQ96DS6 147 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 MOV10Q9HCE1 1003 aaKnown RBP14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 SERGEFQ9UGK8 458 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 POU2F3Q9UKI9 436 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 PCDHGA3Q9Y5H0 932 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 A0A087WUU8 490 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 A0A1W2PQ09 198 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 GKN3PP0CG01 181 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 NTSR1P30989 418 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 TGM4P49221 684 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 RPS15AP62244 130 aaKnown RBP14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 TEKQ02763 1124 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 PCDH1Q08174 1060 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 DMPKQ09013 629 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 ENTPD8Q5MY95 495 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 PLBD1Q6P4A8 553 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 ZNF438Q7Z4V0 828 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 SLC7A7Q9UM01 511 aa14.05□□□□□ -0.16
UBE2D4-201ENST00000222402 GPR89AB7ZAQ6 455 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 UBXN7O94888 489 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 GPR89BP0CG08 455 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 TYRP1P17643 537 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 SRP54P61011 504 aaKnown RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 PRPF38BQ5VTL8 546 aaKnown RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 CXXC5Q7LFL8 322 aaKnown RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 TMEFF1Q8IYR6 380 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 FBXL6Q8N531 539 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 TMEM163Q8TC26 289 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 RBM18Q96H35 190 aaKnown RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 DPH1Q9BZG8 443 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 CACNA1CQ13936 2221 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 PRR23D1E9PI22 279 aaPredicted RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 DSCR3O14972 297 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 IFNGP01579 166 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 PRR23D2P0DMB1 279 aaPredicted RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 CENPAP49450 140 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 TBRG1Q3YBR2 411 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 ZNF542PQ5EBM4 170 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 C1orf53Q5VUE5 145 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 ZNF793Q6ZN11 406 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 SLC16A11Q8NCK7 471 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 FANK1Q8TC84 345 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 NR4A3Q92570 626 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 CNRIP1Q96F85 164 aaPredicted RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 WDR92Q96MX6 357 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 HHIPQ96QV1 700 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 MMP28Q9H239 520 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 YARS2Q9Y2Z4 477 aaKnown RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 C2orf92A0A1B0GVN3 265 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 MAN2B1O00754 1011 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 LGI1O95970 557 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 HOXB3P14651 431 aaPredicted RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 AHRP35869 848 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 RAB40BQ12829 278 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 PPP2R2DQ66LE6 453 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms