RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 PEX19P40855 299 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 RPL14P50914 215 aaKnown RBP17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PDCD2Q16342 344 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 C6orf136Q5SQH8 315 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 SLC22A10Q63ZE4 541 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 RTL6Q6ICC9 239 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 HDXQ7Z353 690 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FNDC5Q8NAU1 212 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FAM13CQ8NE31 585 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ARL8AQ96BM9 186 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PPCDCQ96CD2 204 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ERP27Q96DN0 273 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PPP1R36Q96LQ0 422 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 SORT1Q99523 831 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 C1orf50Q9BV19 199 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TTTY12Q9BZ98 90 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 GLIPR2Q9H4G4 154 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ANKRA2Q9H9E1 313 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ACAD8Q9UKU7 415 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 NPFFR2Q9Y5X5 522 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 LIPGQ9Y5X9 500 aa17.33■□□□□ 0.36
TRAPPC6A-201ENST00000006275 A0A0G2JMM0 328 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 A0A1W2PPB8 328 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 A0A1W2PRS3 328 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 KIR3DP1A8MWS1 328 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 G3V3Y1 287 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 RAF1P04049 648 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 INHBBP09529 407 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 H2AFXP16104 143 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TMED10P49755 219 aaKnown RBP17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 EMDP50402 254 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 DCAF7P61962 342 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 KEAP1Q14145 624 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 NTRK2Q16620 822 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 DEFB113Q30KQ7 82 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 IL23RQ5VWK5 629 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TMEM198Q66K66 360 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ANKRD26P1Q6NSI1 321 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 CLEC9AQ6UXN8 241 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TMEM64Q6YI46 380 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FAM47EQ6ZV65 393 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 LIX1Q8N485 282 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 OR7G2Q8NG99 324 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 LCORQ96JN0 433 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FAM173AQ9BQD7 235 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 NXF5Q9H1B4 397 aaKnown RBP17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 SH3BP4Q9P0V3 963 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 HAO1Q9UJM8 370 aa17.32■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FAM47E-STBD1D6RA91 191 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PDPK1O15530 556 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PLOD3O60568 738 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TBX19O60806 448 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 WDR1O75083 606 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 SLITRK5O94991 958 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 IGHG3P01860 377 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PRPS2P11908 318 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 MAD2L1Q13257 205 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 NNATQ16517 81 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FLYWCH1Q4VC44 716 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ZNF385BQ569K4 471 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 C1orf185Q5T7R7 199 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FBXW10Q5XX13 1052 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ATG16L1Q676U5 607 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 GK5Q6ZS86 529 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TRILQ7L0X0 811 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 R3HCC1LQ7Z5L2 792 aaKnown RBP17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TRIM42Q8IWZ5 723 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PRR22Q8IZ63 422 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 GOLGA6L1Q8N7Z2 621 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 OR10G3Q8NGC4 313 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PAQR8Q8TEZ7 354 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FAM222BQ8WU58 562 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 HSPBAP1Q96EW2 488 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ZNF764Q96H86 408 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 AMDHD1Q96NU7 426 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 SH2D2AQ9NP31 389 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PNPOQ9NVS9 261 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ALKBH4Q9NXW9 302 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 B4GALT7Q9UBV7 327 aa17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 EIF3LQ9Y262 564 aaKnown RBP17.31■□□□□ 0.36
TRAPPC6A-201ENST00000006275 HRNRQ86YZ3 2850 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TP53I11O14683 189 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 DDX5P17844 614 aaKnown RBP17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ABCD3P28288 659 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PIGAP37287 484 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 RPL3P39023 403 aaKnown RBP17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 MC3RP41968 323 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PPICP45877 212 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 DNASE1L1P49184 302 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PDE7AQ13946 482 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 RPS6KA2Q15349 733 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 WLSQ5T9L3 541 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 PRAMEF20Q5VT98 475 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TMEM107Q6UX40 140 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FBXW8Q8N3Y1 598 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 FAM109AQ8N4B1 249 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 TMEM251Q8N6I4 163 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 CIDECQ96AQ7 238 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 MTERF3Q96E29 417 aa17.3■□□□□ 0.36
TRAPPC6A-201ENST00000006275 ATP6V1G3Q96LB4 118 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms