RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 ID2Q02363 134 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 CPSF6Q16630 551 aaKnown RBP eCLIP12.65□□□□□ -0.38
HLA-C-210ENST00000640219 GRAMD1BQ3KR37 738 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 RIPPLY2Q5TAB7 128 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 GRHL2Q6ISB3 625 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 ABHD17CQ6PCB6 329 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 TMEM156Q8N614 296 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 OR7G3Q8NG95 312 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 DOK4Q8TEW6 326 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 MAELQ96JY0 434 aaKnown RBP12.65□□□□□ -0.38
HLA-C-210ENST00000640219 MAPKAP1Q9BPZ7 522 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 EFCAB11Q9BUY7 163 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 EHD1Q9H4M9 534 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 NT5DC2Q9H857 520 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 NOL11Q9H8H0 719 aaKnown RBP12.65□□□□□ -0.38
HLA-C-210ENST00000640219 ZDHHC11Q9H8X9 412 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 ACTR8Q9H981 624 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 TIMMDC1Q9NPL8 285 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 SEMA4BQ9NPR2 832 aaPredicted RBP12.65□□□□□ -0.38
HLA-C-210ENST00000640219 ACAD8Q9UKU7 415 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 ZANQ9Y493 2812 aa12.65□□□□□ -0.38
HLA-C-210ENST00000640219 CLCA1A8K7I4 914 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 A8MT66 165 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 ACOT7O00154 380 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 PSMD12O00232 456 aaPredicted RBP12.64□□□□□ -0.39
HLA-C-210ENST00000640219 LYNP07948 512 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 RNH1P13489 461 aaKnown RBP12.64□□□□□ -0.39
HLA-C-210ENST00000640219 ASCL1P50553 236 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 LIM2P55344 173 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 SH3BGRP55822 239 aaPredicted RBP12.64□□□□□ -0.39
HLA-C-210ENST00000640219 RPS13P62277 151 aaKnown RBP12.64□□□□□ -0.39
HLA-C-210ENST00000640219 E2F2Q14209 437 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 ADPRMQ3LIE5 342 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 PIGGQ5H8A4 983 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 MED27Q6P2C8 311 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 LAS2Q8IYD9 372 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 LRRC75A-AS1Q8N1F1 130 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 PQLC1Q8N2U9 271 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 RELL2Q8NC24 303 aaPredicted RBP12.64□□□□□ -0.39
HLA-C-210ENST00000640219 ADCY4Q8NFM4 1077 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 OR2L5Q8NG80 312 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 HUS1BQ8NHY5 278 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 UCN3Q969E3 161 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 L3HYPDHQ96EM0 354 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 OR1F2PQ96R84 312 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 DEFB126Q9BYW3 111 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 YIPF3Q9GZM5 350 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 IPPKQ9H8X2 491 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 MEAF6Q9HAF1 191 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 PRDM7Q9NQW5 492 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 DEPPQ9NTK1 212 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 ALKBH4Q9NXW9 302 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 NDUFA13Q9P0J0 144 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 PCTPQ9UKL6 214 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 FBXW2Q9UKT8 454 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 TMCO1Q9UM00 188 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 TRAF6Q9Y4K3 522 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 CLDN16Q9Y5I7 305 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 LIPGQ9Y5X9 500 aa12.64□□□□□ -0.39
HLA-C-210ENST00000640219 PINLYPA6NC86 204 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 URADA6NGE7 173 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 WASHC1A8K0Z3 465 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 HSPB2A8KAH6 182 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 SMPD2O60906 423 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 BCAS2O75934 225 aaPredicted RBP12.63□□□□□ -0.39
HLA-C-210ENST00000640219 GOSR1O95249 250 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 IGHG3P01860 377 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 GBAP04062 536 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 UBTFL6P0CB48 400 aaPredicted RBP12.63□□□□□ -0.39
HLA-C-210ENST00000640219 BMP5P22003 454 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 CASP2P42575 452 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 ERFP50548 548 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 RAB38P57729 211 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 PSME3P61289 254 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 TRAP1Q12931 704 aaKnown RBP12.63□□□□□ -0.39
HLA-C-210ENST00000640219 TRAF3Q13114 568 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 HSPB2Q16082 182 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 HIST2H2ACQ16777 129 aaPredicted RBP12.63□□□□□ -0.39
HLA-C-210ENST00000640219 FBXL19-AS1Q494R0 122 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 AGKQ53H12 422 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 SGO1Q5FBB7 561 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 PAGE2BQ5JRK9 111 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 OGFRL1Q5TC84 451 aaPredicted RBP12.63□□□□□ -0.39
HLA-C-210ENST00000640219 HIST2H2AA3Q6FI13 130 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 HMBOX1Q6NT76 420 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 TRIM40Q6P9F5 258 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 TRILQ7L0X0 811 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 SLC22A16Q86VW1 577 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 ARMC10Q8N2F6 343 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 PCYOX1LQ8NBM8 494 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 TTLQ8NG68 377 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 OR2M7Q8NG81 312 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 HBEGFQ99075 208 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 YIPF4Q9BSR8 244 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 COPS7BQ9H9Q2 264 aaPredicted RBP12.63□□□□□ -0.39
HLA-C-210ENST00000640219 PNO1Q9NRX1 252 aaKnown RBP12.63□□□□□ -0.39
HLA-C-210ENST00000640219 FARSBQ9NSD9 589 aaKnown RBP12.63□□□□□ -0.39
HLA-C-210ENST00000640219 ADA2Q9NZK5 511 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 KCMF1Q9P0J7 381 aa12.63□□□□□ -0.39
HLA-C-210ENST00000640219 FOXD3Q9UJU5 478 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms