RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 KCNS2Q9ULS6 477 aa16.23■□□□□ 0.19
CLN6-212ENST00000636020 EMC9Q9Y3B6 208 aa16.23■□□□□ 0.19
CLN6-212ENST00000636020 ZNF337Q9Y3M9 751 aa16.23■□□□□ 0.19
CLN6-212ENST00000636020 A0A0A6YYD5 115 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 SEC14L5O43304 696 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 DLX3O60479 287 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 FESP07332 822 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 FAM58BPP0C7Q3 252 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 EPB42P16452 691 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 GRK2P25098 689 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 PIK3R1P27986 724 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 ARFIP1P53367 373 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 DSCR4P56555 118 aaPredicted RBP16.22■□□□□ 0.19
CLN6-212ENST00000636020 CLDN20P56880 219 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 SPANXN3Q5MJ09 141 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 GBP7Q8N8V2 638 aaPredicted RBP16.22■□□□□ 0.19
CLN6-212ENST00000636020 TRIM2Q9C040 744 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 MOCS1Q9NZB8 636 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 CFL2Q9Y281 166 aa16.22■□□□□ 0.19
CLN6-212ENST00000636020 UQCRHLA0A096LP55 91 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 OR6C70A6NIJ9 312 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 FCGR2AP12318 317 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 NT5EP21589 574 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 BSGP35613 385 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 IRX1P78414 480 aaPredicted RBP16.21■□□□□ 0.19
CLN6-212ENST00000636020 CDKL4Q5MAI5 379 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 OR52E8Q6IFG1 317 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 SULT1C3Q6IMI6 304 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 FAM166AQ6J272 317 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 ATG4DQ86TL0 474 aaPredicted RBP16.21■□□□□ 0.19
CLN6-212ENST00000636020 RNF10Q8N5U6 811 aaKnown RBP16.21■□□□□ 0.19
CLN6-212ENST00000636020 RFLNBQ8N5W9 214 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 METTL25Q8N6Q8 603 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 STEAP2Q8NFT2 490 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 S100PBPQ96BU1 408 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 ADAD1Q96M93 576 aaKnown RBP16.21■□□□□ 0.19
CLN6-212ENST00000636020 COL21A1Q96P44 957 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 CENPKQ9BS16 269 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 DDX31Q9H8H2 851 aaKnown RBP16.21■□□□□ 0.19
CLN6-212ENST00000636020 CHODLQ9H9P2 273 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 CLEC4AQ9UMR7 237 aa16.21■□□□□ 0.19
CLN6-212ENST00000636020 TO15178 435 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 SS18L1O75177 396 aaPredicted RBP16.2■□□□□ 0.18
CLN6-212ENST00000636020 DRD5P21918 477 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
CLN6-212ENST00000636020 SLC6A8P48029 635 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 GZMKP49863 264 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 XKP51811 444 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 GAS1P54826 345 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 TAS2R39P59534 338 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 MGAT2Q10469 447 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 C6orf163Q5TEZ5 329 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 RAET1LQ5VY80 246 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 TXLNBQ8N3L3 684 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 OR4K17Q8NGC6 315 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 OR4K14Q8NGD5 310 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 SGMS2Q8NHU3 365 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 HUS1BQ8NHY5 278 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 GMPPAQ96IJ6 420 aaPredicted RBP16.2■□□□□ 0.18
CLN6-212ENST00000636020 STMN4Q9H169 189 aaPredicted RBP16.2■□□□□ 0.18
CLN6-212ENST00000636020 MANSC1Q9H8J5 431 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 PLAC1Q9HBJ0 212 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 NGBQ9NPG2 151 aa16.2■□□□□ 0.18
CLN6-212ENST00000636020 PPANQ9NQ55 473 aaKnown RBP16.2■□□□□ 0.18
CLN6-212ENST00000636020 CISD1Q9NZ45 108 aaKnown RBP16.2■□□□□ 0.18
CLN6-212ENST00000636020 C17orf51A8MQB3 221 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 LINC01387J3KSC0 135 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 TCF21O43680 179 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 CCNT2O60583 730 aaKnown RBP16.19■□□□□ 0.18
CLN6-212ENST00000636020 BANF1O75531 89 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 CPMP14384 443 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 HNF1AP20823 631 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 ADH6P28332 368 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 PPICP45877 212 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 CTBP2P56545 445 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 RPS3AP61247 264 aaKnown RBP16.19■□□□□ 0.18
CLN6-212ENST00000636020 LSM11P83369 360 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLN6-212ENST00000636020 DDX39BQ13838 428 aaKnown RBP16.19■□□□□ 0.18
CLN6-212ENST00000636020 EXOSC7Q15024 291 aaKnown RBP16.19■□□□□ 0.18
CLN6-212ENST00000636020 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLN6-212ENST00000636020 FAM174BQ3ZCQ3 159 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 TTC27Q6P3X3 843 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 FAM111BQ6SJ93 734 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 CYP20A1Q6UW02 462 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 GPSM1Q86YR5 675 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 DEPDC4Q8N2C3 294 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 ZNF525Q8N782 197 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.19■□□□□ 0.18
CLN6-212ENST00000636020 ADCY4Q8NFM4 1077 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 RNF138Q8WVD3 245 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 PROX1Q92786 737 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 GFM2Q969S9 779 aaKnown RBP16.19■□□□□ 0.18
CLN6-212ENST00000636020 TMBIM1Q969X1 311 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 SLC35A4Q96G79 324 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 DESI2Q9BSY9 194 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 HDHD5Q9BXW7 423 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 FAIMQ9NVQ4 179 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 BCAP29Q9UHQ4 241 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 ZNF639Q9UID6 485 aa16.19■□□□□ 0.18
CLN6-212ENST00000636020 SNX8Q9Y5X2 465 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms