RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, human

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00339-208	ENST00000634934	NBEA	Q8NFP9	2946 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934		A0A087WV48	116 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	RNF103-CHMP3	A0A140T963	221 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	PRORSD1P	A6NEY8	169 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	UPK1A	O00322	258 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	PLOD2	O00469	737 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	RRP8	O43159	456 aa	Known RBP	13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	EMC8	O43402	210 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	PLOD3	O60568	738 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ERN1	O75460	977 aa	Known RBP	13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	DDAH2	O95865	285 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	GPI	P06744	558 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	WT1	P19544	449 aa	Predicted RBP	13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	UQCRC2	P22695	453 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	SOX18	P35713	384 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	CHI3L1	P36222	383 aa	Predicted RBP	13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ALDH3B2	P48448	385 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	PRR5	P85299	388 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	TP53BP2	Q13625	1128 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	CAPRIN1	Q14444	709 aa	Known RBP	13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	KCTD21	Q4G0X4	260 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ANGPTL8	Q6UXH0	198 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	FKBP9P1	Q75LS8	142 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	DHFR2	Q86XF0	187 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	PTRH1	Q86Y79	214 aa	Known RBP	13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	AMER2	Q8N7J2	671 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ZNF321P	Q8N8H1	164 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	MORN4	Q8NDC4	146 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	SIMC1	Q8NDZ2	872 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	OR52R1	Q8NGF1	315 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	DNAJB8	Q8NHS0	232 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ADAMTS17	Q8TE56	1095 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	NCLN	Q969V3	563 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	EME1	Q96AY2	570 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	CTHRC1	Q96CG8	243 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	FAM120B	Q96EK7	910 aa	Known RBP	13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	FBXL20	Q96IG2	436 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ART5	Q96L15	291 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	SLC35A5	Q9BS91	424 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ZNF160	Q9HCG1	818 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ADA2	Q9NZK5	511 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	ACTR3B	Q9P1U1	418 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	COPS7A	Q9UBW8	275 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934	PCDHB14	Q9Y5E9	798 aa		13.44	□□□□□ -0.26
LINC00339-208	ENST00000634934		A0A087WV62	115 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	ZNF891	A8MT65	544 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	CBX7	O95931	251 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	UMPS	P11172	480 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	S1PR1	P21453	382 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	ERF	P50548	548 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	SLC26A5	P58743	744 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	TLE3	Q04726	772 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	FUT7	Q11130	342 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	BTBD16	Q32M84	506 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	LRIF1	Q5T3J3	769 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	DLEU7	Q6UYE1	221 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	TMEM64	Q6YI46	380 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	OR2L13	Q8N349	312 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	PAPD5	Q8NDF8	572 aa	Known RBP	13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	NFAM1	Q8NET5	270 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	NUP43	Q8NFH3	380 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	B3GNT7	Q8NFL0	401 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	OR56A1	Q8NGH5	318 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	ZNF721	Q8TF20	911 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	SLCO4A1	Q96BD0	722 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	AURKB	Q96GD4	344 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	IP6K3	Q96PC2	410 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	NUDT9	Q9BW91	350 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	OR10A5	Q9H207	317 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	EQTN	Q9NQ60	294 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	ZNF639	Q9UID6	485 aa		13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.43	□□□□□ -0.26
LINC00339-208	ENST00000634934		A0A1W2PQ72	361 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	MASP2	O00187	686 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	NME6	O75414	186 aa	Predicted RBP	13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	H6PD	O95479	791 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	HP	P00738	406 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	PTPN6	P29350	595 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	EXT1	Q16394	746 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	FHL5	Q5TD97	284 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	BHLHB9	Q6PI77	547 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	C19orf48	Q6RUI8	117 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	LRRC69	Q6ZNQ3	347 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	C6orf120	Q7Z4R8	191 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	SATL1	Q86VE3	508 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	MSRB3	Q8IXL7	192 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	ZSCAN1	Q8NBB4	408 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	OR7G1	Q8NGA0	311 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	OR1N1	Q8NGS0	311 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	PNPT1	Q8TCS8	783 aa	Known RBP	13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	SFXN5	Q8TD22	340 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	LZIC	Q8WZA0	190 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	POP5	Q969H6	163 aa	Known RBP	13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	MOAP1	Q96BY2	351 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	LRRC58	Q96CX6	371 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	IMMP1L	Q96LU5	166 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	PHF12	Q96QT6	1004 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	CGREF1	Q99674	301 aa		13.42	□□□□□ -0.26
LINC00339-208	ENST00000634934	SLC39A3	Q9BRY0	314 aa		13.42	□□□□□ -0.26

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