RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 EEDO75530 441 aaKnown RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 OR6B1O95007 311 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 MLYCDO95822 493 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ZGLP1P0C6A0 271 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 FAM58BPP0C7Q3 252 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 LINC00032P0C843 101 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 UROSP10746 265 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NSG1P42857 185 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TTPAP49638 278 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 AGTR2P50052 363 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF33BQ06732 778 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 VPS26BQ4G0F5 336 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 INTS11Q5TA45 600 aaKnown RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 UGT3A1Q6NUS8 523 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 FIGLAQ6QHK4 219 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 IGFL3Q6UXB1 125 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NCCRP1Q6ZVX7 275 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 EPHX4Q8IUS5 362 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 VRK3Q8IV63 474 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ADGRG5Q8IZF4 528 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 PACRGLQ8N7B6 248 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 EME1Q96AY2 570 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 LRRC58Q96CX6 371 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 PDLIM5Q96HC4 596 aaKnown RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 MRGPRX4Q96LA9 322 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 LINC00615Q96LM1 132 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TEX37Q96LM6 180 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CNBD2Q96M20 576 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SERINC2Q96SA4 455 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 C19orf43Q9BQ61 176 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ANKRD60Q9BZ19 345 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 OR6C2Q9NZP2 312 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ACTR3BQ9P1U1 418 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 MYOTQ9UBF9 498 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 GRHPRQ9UBQ7 328 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TINAGQ9UJW2 476 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 IGHV3-20A0A0C4DH32 117 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 C17orf113A0A1B0GUU1 675 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TRIM64CA6NLI5 447 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 VPS26AO75436 327 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 PGM3O95394 542 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NADKO95544 446 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 FTH1P02794 183 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 OR56A5P0C7T3 313 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 PEBP1P30086 187 aaKnown RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 KIR2DL2P43627 348 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 RAB28P51157 221 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 DIO3P55073 304 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CACNG1Q06432 222 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 DBPQ10586 325 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 GRM7Q14831 915 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 GPR33Q49SQ1 333 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NHSL2Q5HYW2 709 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TTC23LQ6PF05 361 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 DDIASQ8IXT1 998 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TBC1D21Q8IYX1 336 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 GALNT4Q8N4A0 578 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TTC29Q8NA56 475 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 PAPD5Q8NDF8 572 aaKnown RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SUN3Q8TAQ9 357 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 STT3BQ8TCJ2 826 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CANT1Q8WVQ1 401 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TUBGCP3Q96CW5 907 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 LINGO1Q96FE5 620 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CCDC120Q96HB5 630 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TAAR6Q96RI8 345 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SLC29A1Q99808 456 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CCT7Q99832 543 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TRIM15Q9C019 465 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CCDC68Q9H2F9 335 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SEMA4BQ9NPR2 832 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NUDT4Q9NZJ9 180 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SCN3AQ9NY46 2000 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 PCSK5Q92824 1860 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 LOC105369274A0A096LPK9 316 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 LOC102723532A0A0G2JNH3 316 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 A0A1B0GUH1 482 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 OR2W5A6NFC9 320 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 TRIM64A6NGJ6 449 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 SOCS6O14544 535 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ANGPT2O15123 496 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ARPC2O15144 300 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 WISP2O76076 250 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CLPTM1O96005 669 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CD63P08962 238 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 HSD3B1P14060 373 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CHRM3P20309 590 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 RPS3P23396 243 aaKnown RBP eCLIP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 BDKRB1P46663 353 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ARSFP54793 590 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 CASP6P55212 293 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 NME5P56597 212 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 ERVK-8P63133 956 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 OC90Q02509 493 aaPredicted RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 Q0VFX4 171 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 MPEG1Q2M385 716 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 AARS2Q5JTZ9 985 aaKnown RBP4.52□□□□□ -1.69
LINC00550-201ENST00000629293 FRMPD2BQ6IN97 320 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 RNF165Q6ZSG1 346 aa4.52□□□□□ -1.69
LINC00550-201ENST00000629293 GPRIN3Q6ZVF9 776 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms