RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 MRPS35P82673 323 aaKnown RBP18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 CBX1P83916 185 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 MLC1Q15049 377 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 VPS26BQ4G0F5 336 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 ANXA8L1Q5VT79 327 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 FAM111BQ6SJ93 734 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 Q6ZPB1 254 aaPredicted RBP18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 MRGPRGQ86SM5 289 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 DAZLQ92904 295 aaKnown RBP18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 CTHRC1Q96CG8 243 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 SPDL1Q96EA4 605 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 CCDC106Q9BWC9 280 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 ZNF223Q9UK11 482 aaPredicted RBP18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 ERVK-11Q9UQG0 969 aa18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 KLF13Q9Y2Y9 288 aaPredicted RBP18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 KLF2Q9Y5W3 355 aaPredicted RBP18.42■□□□□ 0.54
R3HCC1-210ENST00000625275 CCDC154A6NI56 674 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 DCTN3O75935 186 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 CDK9P50750 372 aaKnown RBP18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 HBA1P69905 142 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 MAP4K2Q12851 820 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 ZNF267Q14586 743 aaPredicted RBP18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 SP5Q6BEB4 398 aaPredicted RBP18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 TMEM107Q6UX40 140 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 SPPL2CQ8IUH8 684 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 VWA5B2Q8N398 1253 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 VPS37AQ8NEZ2 397 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 SLC2A12Q8TD20 617 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 OR5P2Q8WZ92 322 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 KAT2AQ92830 837 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 NCLNQ969V3 563 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 SENP5Q96HI0 755 aaPredicted RBP18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 FBXL20Q96IG2 436 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 LRRC37BQ96QE4 947 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 CNPPD1Q9BV87 410 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 OR8D2Q9GZM6 311 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 ERVK-19Q9WJR5 959 aa18.41■□□□□ 0.54
R3HCC1-210ENST00000625275 CFLARO15519 480 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 ASNA1O43681 348 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 DYRK3O43781 588 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 ITGA10O75578 1167 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 GPC1P35052 558 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 MC3RP41968 323 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 GPR143P51810 404 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 TRMT12Q53H54 448 aaKnown RBP18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 RNFT1Q5M7Z0 435 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 BNC2Q6ZN30 1099 aaPredicted RBP18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 MSANTD1Q6ZTZ1 278 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 TREML1Q86YW5 311 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 CYP4Z2PQ8N1L4 340 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 GHDCQ8N2G8 530 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 TMEM156Q8N614 296 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 ZNF321PQ8N8H1 164 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 POGLUT1Q8NBL1 392 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 MORN4Q8NDC4 146 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 SIMC1Q8NDZ2 872 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 OR7G2Q8NG99 324 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 ZNF721Q8TF20 911 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 CCDC115Q96NT0 180 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 ANKRA2Q9H9E1 313 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 SERHLQ9NQF3 203 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 SIRT3Q9NTG7 399 aaPredicted RBP18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 BTNL2Q9UIR0 455 aa18.4■□□□□ 0.54
R3HCC1-210ENST00000625275 A0A1W2PP18 115 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 IGKV3-11P04433 115 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 ABCB1P08183 1280 aaPredicted RBP18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 SNRPB2P08579 225 aaKnown RBP18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 ESRRAP11474 423 aaPredicted RBP18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 S1PR1P21453 382 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 SSTR4P31391 388 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 ADORA2A-AS1P86434 159 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 FUT7Q11130 342 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 C6orf163Q5TEZ5 329 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 PSMA8Q8TAA3 256 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 ELP4Q96EB1 424 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 INPP5KQ9BT40 448 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 NEUROD4Q9HD90 331 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 TAS2R9Q9NYW1 312 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 ZNF639Q9UID6 485 aa18.39■□□□□ 0.54
R3HCC1-210ENST00000625275 CAPN14A8MX76 684 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 PLOD2O00469 737 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 ZFAND5O76080 213 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 SLITRK5O94991 958 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 CLPSP04118 112 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 FREM3P0C091 2139 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 ABOP16442 354 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 GRNP28799 593 aaKnown RBP18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 MEOX1P50221 254 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 EXOSC7Q15024 291 aaKnown RBP18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 XKRXQ6PP77 449 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 SLC2A7Q6PXP3 512 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 SNX32Q86XE0 403 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 OR4A15Q8NGL6 344 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 TSPEARQ8WU66 669 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 ERP27Q96DN0 273 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 ART5Q96L15 291 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 CXorf36Q9H7Y0 433 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 RMND5AQ9H871 391 aa18.39■□□□□ 0.53
R3HCC1-210ENST00000625275 INTS1Q8N201 2190 aaKnown RBP18.38■□□□□ 0.53
R3HCC1-210ENST00000625275 NINQ8N4C6 2090 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 461 ms