RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TIMM29Q9BSF4 260 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 AICDAQ9GZX7 198 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 POLR2J3Q9H1A7 115 aaKnown RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 OR51I1Q9H343 314 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 EHD3Q9NZN3 535 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 PNMA8CA0A1B0GUJ8 204 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 A0A1W2PRQ8 180 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 SH3BP5O60239 455 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 LCMT2O60294 686 aaKnown RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 KDM1AO60341 852 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 OR12D1P0DN82 309 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 MPLP40238 635 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 TCEA2Q15560 299 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 MFSD4BQ5TF39 518 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 CD300LDQ6UXZ3 194 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 WDR53Q7Z5U6 358 aaPredicted RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 COMTD1Q86VU5 262 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 POC5Q8NA72 575 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 UCN3Q969E3 161 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 TMEM80Q96HE8 168 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 AMDHD1Q96NU7 426 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 ARRDC1-AS1Q9H2J1 176 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 OSGEPL1Q9H4B0 414 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 GLIPR2Q9H4G4 154 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 DNAJC27Q9NZQ0 273 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 APOBEC3BQ9UH17 382 aaKnown RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 RPL36Q9Y3U8 105 aaKnown RBP16.39■□□□□ 0.21
FAM3A-222ENST00000621967 PCDHGB6Q9Y5F9 930 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 PCDHGA5Q9Y5G8 931 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 LRP4O75096 1905 aa16.39■□□□□ 0.21
FAM3A-222ENST00000621967 DNAH14Q0VDD8 3507 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 CACNA1EQ15878 2313 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 TP53BP1Q12888 1972 aaPredicted RBP16.38■□□□□ 0.21
FAM3A-222ENST00000621967 IGKV1-8A0A0C4DH67 115 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 CSO75390 466 aaKnown RBP16.38■□□□□ 0.21
FAM3A-222ENST00000621967 UGT2B17O75795 530 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 CTSEP14091 401 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 NME1P15531 152 aaKnown RBP16.38■□□□□ 0.21
FAM3A-222ENST00000621967 CLCNKAP51800 687 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 ZNF91Q05481 1191 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 DMPKQ09013 629 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 TRIM61Q5EBN2 209 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 CASP12Q6UXS9 341 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 GDPGP1Q6ZNW5 385 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 HPS1Q92902 700 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 DPH7Q9BTV6 452 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 TMEM168Q9H0V1 697 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 BCL2L10Q9HD36 194 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 KLF15Q9UIH9 416 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 ACSL5Q9ULC5 683 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 KCNK6Q9Y257 313 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 PI4KAP42356 2102 aa16.38■□□□□ 0.21
FAM3A-222ENST00000621967 H3BN98 237 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 CSF2P04141 144 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 GTF2E2P29084 291 aaKnown RBP16.37■□□□□ 0.21
FAM3A-222ENST00000621967 ILF3Q12906 894 aaKnown RBP eCLIP16.37■□□□□ 0.21
FAM3A-222ENST00000621967 SLC25A30Q5SVS4 291 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 NDUFAF5Q5TEU4 345 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 TMEM64Q6YI46 380 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 ZNF793Q6ZN11 406 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 OR5D16Q8NGK9 328 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 TXNDC15Q96J42 360 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 MND1Q9BWT6 205 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 TCEAL2Q9H3H9 227 aaPredicted RBP16.37■□□□□ 0.21
FAM3A-222ENST00000621967 MVB12BQ9H7P6 319 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 SLC35C2Q9NQQ7 365 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 MAN2C1Q9NTJ4 1040 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 LRIT2A6NDA9 550 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 PATE3B3GLJ2 98 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 KCNJ13O60928 360 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 KCNK2O95069 426 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 EPPINO95925 133 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 PPP2R1BP30154 601 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 SSR2P43308 183 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 SEPHS1P49903 392 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 HNRNPKP61978 463 aaKnown RBP eCLIP16.37■□□□□ 0.21
FAM3A-222ENST00000621967 PRDX1Q06830 199 aaKnown RBP16.37■□□□□ 0.21
FAM3A-222ENST00000621967 COX10Q12887 443 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 TARDBPQ13148 414 aaKnown RBP eCLIP16.37■□□□□ 0.21
FAM3A-222ENST00000621967 SPHARQ15513 63 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 ZIC1Q15915 447 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 NDUFA9Q16795 377 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 PRRT3Q5FWE3 981 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 PODNL1Q6PEZ8 512 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 KRT73Q86Y46 540 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 RAB42Q8N4Z0 105 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 LINC00471Q8N535 108 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 FAM26EQ8N5C1 309 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 NANOGP1Q8N7R0 232 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 TTLQ8NG68 377 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 OR2A1Q8NGT9 310 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 BBS10Q8TAM1 723 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 HTRA1Q92743 480 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 POLDIP3Q9BY77 421 aaKnown RBP16.37■□□□□ 0.21
FAM3A-222ENST00000621967 ERVMER34-1Q9H9K5 563 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 SIAEQ9HAT2 523 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 C3orf14Q9HBI5 128 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 CLEC2DQ9UHP7 191 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 WDR37Q9Y2I8 494 aa16.37■□□□□ 0.21
FAM3A-222ENST00000621967 PLEKHM1Q9Y4G2 1056 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms