RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 A6NLC8 198 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ZNF99A8MXY4 864 aaPredicted RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 TNFRSF10CO14798 259 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 XPNPEP2O43895 674 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 RAB36O95755 333 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 GKN3PP0CG01 181 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ACPPP15309 386 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 GSTM2P28161 218 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 AHRP35869 848 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ADAM15Q13444 863 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 CARTPTQ16568 116 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 C14orf28Q4W4Y0 310 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 KLHL26Q53HC5 615 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 HENMT1Q5T8I9 393 aaKnown RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 KCTD18Q6PI47 426 aaPredicted RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 PAPD4Q6PIY7 484 aaKnown RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 TMEM64Q6YI46 380 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 LINC00696Q6ZRV3 163 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 NRMQ8IXM6 262 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ZNF440Q8IYI8 595 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 S100ZQ8WXG8 99 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ARRDC1-AS1Q9H2J1 176 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 EURLQ9NYK6 297 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ABCA3Q99758 1704 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 A0A1W2PQ72 361 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 TLCD2A6NGC4 264 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 WRBO00258 174 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 FAAHO00519 579 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 CSN2P05814 226 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 HTR1AP08908 422 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 DHRS4L1P0CG22 281 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 RHCEP18577 417 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 CAPZA1P52907 286 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 CTXN1P60606 82 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ZP2Q05996 745 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 AFMIDQ63HM1 303 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 OLFML2AQ68BL7 652 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ENPP6Q6UWR7 440 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 LHFPL3Q86UP9 236 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 OR4K13Q8NH42 304 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 TM9SF4Q92544 642 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 FCGR1BQ92637 280 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 HS6ST2Q96MM7 605 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 MUS81Q96NY9 551 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 OR5B2Q96R09 309 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 SECISBP2Q96T21 854 aaKnown RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 SORT1Q99523 831 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 NAA11Q9BSU3 229 aaPredicted RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 HOXD1Q9GZZ0 328 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 A0A0G2JPF8 293 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 HNRNPCL3B7ZW38 293 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 G3V3Y1 287 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 E2F3O00716 465 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 HNRNPCL4P0DMR1 293 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 GRPRP30550 384 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 SLC5A2P31639 672 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 PYCR1P32322 319 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 VASPP50552 380 aaPredicted RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 FOXK1P85037 733 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 CDKL1Q00532 357 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 PRAMEF20Q5VT98 475 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 C1orf53Q5VUE5 145 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 FAM111BQ6SJ93 734 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 SBSNQ6UWP8 590 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ZNF627Q7L945 461 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 SYNPOQ8N3V7 929 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 SNIP1Q8TAD8 396 aaKnown RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 HTRA1Q92743 480 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 RBM24Q9BX46 236 aaKnown RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 C1QTNF1Q9BXJ1 281 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ANKRA2Q9H9E1 313 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 TAS2R7Q9NYW3 318 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 RIMS3Q9UJD0 308 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.72□□□□□ -1.01
GGA3-223ENST00000621870 LRRC42Q9Y546 428 aa8.72□□□□□ -1.01
GGA3-223ENST00000621870 A0A1W2PPC4 97 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 TRAPPC13A5PLN9 417 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 ARL6IP5O75915 188 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 H2BFMP0C1H6 154 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 CR2P20023 1033 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 S1PR1P21453 382 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 GGT2P36268 569 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 OPRD1P41143 372 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 DCDP81605 110 aaKnown RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 TLE3Q04726 772 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 DLX2Q07687 328 aaPredicted RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 SLC5A12Q1EHB4 618 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 SLCO4C1Q6ZQN7 724 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 MAMDC2Q7Z304 686 aaPredicted RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 PLPP6Q8IY26 295 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 CYB561A3Q8NBI2 242 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 ELF4Q99607 663 aaPredicted RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 PITX2Q99697 317 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 IFT46Q9NQC8 304 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 CCM2LQ9NUG4 571 aaPredicted RBP8.71□□□□□ -1.01
GGA3-223ENST00000621870 ZNF222Q9UK12 451 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 FKBP7Q9Y680 259 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 ENPP4Q9Y6X5 453 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 UBR3Q6ZT12 1888 aa8.71□□□□□ -1.01
GGA3-223ENST00000621870 MAST2Q6P0Q8 1798 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms