RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 AADACL4Q5VUY2 407 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 ZNF547Q8IVP9 402 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 SLC39A11Q8N1S5 342 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 ZNF764Q96H86 408 aaPredicted RBP18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 BCL2L10Q9HD36 194 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 ASB6Q9NWX5 421 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 CNIH4Q9P003 139 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 EXTL2Q9UBQ6 330 aa18.4■□□□□ 0.54
PDLIM3-212ENST00000620787 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 GTPBP1O00178 669 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 TEX28O15482 410 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 LANCL1O43813 399 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 ACP5P13686 325 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 BUD31P41223 144 aaPredicted RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 TSPAN31Q12999 210 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 FAM205BPQ63HN1 556 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 NR2C2APQ86WQ0 139 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 KLHL36Q8N4N3 616 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 SPRYD4Q8WW59 207 aaPredicted RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 OTULINQ96BN8 352 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 CLIP3Q96DZ5 547 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 DTD2Q96FN9 168 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 GLIPR2Q9H4G4 154 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 CUEDC1Q9NWM3 386 aaPredicted RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 FABP7O15540 132 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 PAHP00439 452 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 POU3F3P20264 500 aaPredicted RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 MLLT1Q03111 559 aaPredicted RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 FZD5Q13467 585 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 MLC1Q15049 377 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 PLA1AQ53H76 456 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 ANKRD54Q6NXT1 300 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 B3GLCTQ6Y288 498 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 RASSF6Q6ZTQ3 369 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 PARS2Q7L3T8 475 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 SLC38A6Q8IZM9 456 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 GHDCQ8N2G8 530 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 OR5AR1Q8NGP9 310 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 OR4Q3Q8NH05 313 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 MAP6Q96JE9 813 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 COQ10AQ96MF6 247 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 UBL7Q96S82 380 aaPredicted RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 SPATA5L1Q9BVQ7 753 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 BTBD1Q9H0C5 482 aa18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 EXOGQ9Y2C4 368 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-212ENST00000620787 A0A0A6YYJ9 748 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 MEN1O00255 615 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 CHP2O43745 196 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 IGHA1P01876 353 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 FCN2Q15485 313 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 CCDC85BQ15834 202 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 WDR45BQ5MNZ6 344 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 ZBTB37Q5TC79 503 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 LHX8Q68G74 356 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 TMEM107Q6UX40 140 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 C17orf64Q86WR6 236 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 DNAJC5GQ8N7S2 189 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 AMER3Q8N944 861 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 OR52N1Q8NH53 320 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 FAM46AQ96IP4 442 aaKnown RBP18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 GPR137Q96N19 417 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 ZCCHC2Q9C0B9 1178 aaKnown RBP18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 HDHD2Q9H0R4 259 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 NT5DC2Q9H857 520 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 FOLH1BQ9HBA9 442 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 ZCCHC3Q9NUD5 404 aaKnown RBP18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 SAGE1Q9NXZ1 904 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 TAC3Q9UHF0 121 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 FEZF1A0PJY2 475 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 SHOXO15266 292 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 CHST10O43529 356 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 CH25HO95992 272 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 TFPIP10646 304 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 TYRP14679 529 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 TRIM23P36406 574 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 KHKP50053 298 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 AP2S1P53680 142 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 ATP12AP54707 1039 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 KIAA1161Q6NSJ0 714 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 ZNF782Q6ZMW2 699 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 NUDT13Q86X67 352 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 RFKQ969G6 155 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 AMDHD1Q96NU7 426 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 YIPF4Q9BSR8 244 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 DPEP2Q9H4A9 486 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 PELI2Q9HAT8 420 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 TDP1Q9NUW8 608 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 ASF1AQ9Y294 204 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 NCKAP1Q9Y2A7 1128 aa18.38■□□□□ 0.53
PDLIM3-212ENST00000620787 SURF4O15260 269 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 EFCAB14O75071 495 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 TSC22D2O75157 780 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 RFPL3O75679 317 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 POP7O75817 140 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 BICRALQ6AI39 1079 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 SLC30A6Q6NXT4 461 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 UBE3DQ7Z6J8 389 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 BBS1Q8NFJ9 593 aa18.37■□□□□ 0.53
PDLIM3-212ENST00000620787 OR8H1Q8NGG4 311 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms