RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 FOSL1P15407 271 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 S100A1P23297 94 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 WASP42768 502 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 AVPR1BP47901 424 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 RAB8AP61006 207 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 HTRA4P83105 476 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-215ENST00000617482 CHRNEQ04844 493 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 RAB40BQ12829 278 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 KRT33BQ14525 404 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 COL19A1Q14993 1142 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 GAB4Q2WGN9 574 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 DDI2Q5TDH0 399 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 C1orf53Q5VUE5 145 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 XKRXQ6PP77 449 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 SLC36A4Q6YBV0 504 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 ZNF730Q6ZMV8 503 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 RRM2BQ7LG56 351 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 ACOT4Q8N9L9 421 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 PAWRQ96IZ0 340 aaKnown RBP11.08□□□□□ -0.64
C11orf54-215ENST00000617482 MSLNLQ96KJ4 702 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 TTYH2Q9BSA4 534 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 BEX2Q9BXY8 128 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 OR2B2Q9GZK3 357 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 SLC22A4Q9H015 551 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 NT5DC2Q9H857 520 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 BCL2L10Q9HD36 194 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 SEMA4GQ9NTN9 838 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 MALT1Q9UDY8 824 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 SF3B6Q9Y3B4 125 aaKnown RBP11.08□□□□□ -0.64
C11orf54-215ENST00000617482 PLEKHM1Q9Y4G2 1056 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 COL4A3Q01955 1670 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 PRR23AA6NEV1 266 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 CENPXA8MT69 81 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 PAK4O96013 591 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-215ENST00000617482 GSTM3P21266 225 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 TRHRP34981 398 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-215ENST00000617482 RACK1P63244 317 aaKnown RBP11.08□□□□□ -0.64
C11orf54-215ENST00000617482 INSL4Q14641 139 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 PIP5KL1Q5T9C9 394 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 SLC30A6Q6NXT4 461 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 LINC00471Q8N535 108 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 ATP6V1C2Q8NEY4 427 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 OR4F15Q8NGB8 312 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 UFD1Q92890 307 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 ZNF707Q96C28 371 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-215ENST00000617482 MS4A6EQ96DS6 147 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 CAMK1GQ96NX5 476 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 DCLRE1CQ96SD1 692 aaKnown RBP11.08□□□□□ -0.64
C11orf54-215ENST00000617482 TMED9Q9BVK6 235 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 HDHD5Q9BXW7 423 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 MCOLN1Q9GZU1 580 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 PRSS16Q9NQE7 514 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 SLC13A4Q9UKG4 626 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 SNX7Q9UNH6 387 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 ASB4Q9Y574 426 aa11.08□□□□□ -0.64
C11orf54-215ENST00000617482 KIAA1549LQ6ZVL6 1849 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 A0A0G2JPF8 293 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 HNRNPCL2B2RXH8 293 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 HNRNPCL3B7ZW38 293 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 C1QTNF3-AMACRE9PGA6 284 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 CASKO14936 926 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 NCR1O76036 304 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 LALBAP00709 142 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 LIMS3P0CW19 117 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 LIMS4P0CW20 117 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 HNRNPCL4P0DMR1 293 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 HIST1H1TP22492 207 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 CERS1P27544 350 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 APEX1P27695 318 aaKnown RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 MC3RP41968 323 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 TRA2BP62995 288 aaKnown RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 NDUFA5Q16718 116 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 KIAA1161Q6NSJ0 714 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 KIAA1211LQ6NV74 962 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 HSDL2Q6YN16 418 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 TRIM48Q8IWZ4 208 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 RAB42Q8N4Z0 105 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 GNPDA2Q8TDQ7 276 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 KAT2AQ92830 837 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 ZNF764Q96H86 408 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 SLC38A2Q96QD8 506 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 OR7D2Q96RA2 312 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 PINK1Q9BXM7 581 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 TBC1D17Q9HA65 648 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 MRPS30Q9NP92 439 aaKnown RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 FGF20Q9NP95 211 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 PRDM7Q9NQW5 492 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 NUFIP1Q9UHK0 495 aaKnown RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 MOSPD1Q9UJG1 213 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 HEATR5BQ9P2D3 2071 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 MYO10Q9HD67 2058 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 TMEM129A0AVI4 362 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 SNTNA6NMZ2 147 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 POLR1CO15160 346 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 UBXN7O94888 489 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 AIFM1O95831 613 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 HNRNPA1P09651 372 aaKnown RBP eCLIP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 GNSP15586 552 aa11.07□□□□□ -0.64
C11orf54-215ENST00000617482 ATP5A1P25705 553 aaKnown RBP11.07□□□□□ -0.64
C11orf54-215ENST00000617482 UBE3AQ05086 875 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms