RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 ATCAYQ86WG3 371 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 OR4M2Q8NGB6 313 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 SLC38A5Q8WUX1 472 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 ZBED6CLQ96FA7 236 aaPredicted RBP13.55□□□□□ -0.24
EPHB4-210ENST00000616502 RAD9AQ99638 391 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 THAP7Q9BT49 309 aaPredicted RBP13.55□□□□□ -0.24
EPHB4-210ENST00000616502 EFCAB11Q9BUY7 163 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 SPATA5L1Q9BVQ7 753 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 TMEM138Q9NPI0 162 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.55□□□□□ -0.24
EPHB4-210ENST00000616502 POM121CA8CG34 1229 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 J3QLW9 94 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 STX11O75558 287 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 ZNF19P17023 458 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 CD22P20273 847 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 UQCRC2P22695 453 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 SPINT3P49223 89 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 SRP9P49458 86 aaKnown RBP13.55□□□□□ -0.24
EPHB4-210ENST00000616502 BTN1A1Q13410 526 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 GRHL2Q6ISB3 625 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 ACSM5Q6NUN0 579 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 LINGO2Q7L985 606 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 FTMTQ8N4E7 242 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 MRPL43Q8N983 215 aaKnown RBP13.55□□□□□ -0.24
EPHB4-210ENST00000616502 COQ8AQ8NI60 647 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 SLC7A13Q8TCU3 470 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 UBE2E3Q969T4 207 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 SCRN2Q96FV2 425 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 FAM46AQ96IP4 442 aaKnown RBP13.55□□□□□ -0.24
EPHB4-210ENST00000616502 GTPBP2Q9BX10 602 aaKnown RBP13.55□□□□□ -0.24
EPHB4-210ENST00000616502 FOLH1BQ9HBA9 442 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 BRD7Q9NPI1 651 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 KLHL21Q9UJP4 597 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 SPAG17Q6Q759 2223 aa13.55□□□□□ -0.24
EPHB4-210ENST00000616502 B8ZZF3 427 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 ZDHHC11BP0C7U3 371 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 C4BPBP20851 252 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 ACVR2AP27037 513 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 GIFP27352 417 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 ANXA11P50995 505 aaKnown RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 SEC23BQ15437 767 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 TMC8Q8IU68 726 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 PIGXQ8TBF5 258 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 ERMAPQ96PL5 475 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 QRSL1Q9H0R6 528 aaKnown RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 KCNN3Q9UGI6 736 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 FBXW2Q9UKT8 454 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 BAIAP2Q9UQB8 552 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 IRGMA1A4Y4 181 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 IGLV3-27P01718 113 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 RLN1P04808 185 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 NCBP2P52298 156 aaKnown RBP eCLIP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 MAZP56270 477 aaKnown RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 LGALS3BPQ08380 585 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 TMEM115Q12893 351 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 PRAMEF14Q5SWL7 426 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 CREB3L2Q70SY1 520 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 OR52L1Q8NGH7 329 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 OR4K3Q96R72 315 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 ZCCHC2Q9C0B9 1178 aaKnown RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 RANBP3Q9H6Z4 567 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 NIPAL2Q9H841 368 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 ATP13A2Q9NQ11 1180 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 P2RX2Q9UBL9 471 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 UBQLN2Q9UHD9 624 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 TAC3Q9UHF0 121 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 ENTPD4Q9Y227 616 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 TRAPPC4Q9Y296 219 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 CACNA1EQ15878 2313 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 IQCMA0A1B0GVH7 501 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 REM1O75628 298 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 PAHP00439 452 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 ZNF8P17098 575 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 PKLRP30613 574 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 HSF2Q03933 536 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 SGCGQ13326 291 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 PLK5Q496M5 336 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 GARNL3Q5VVW2 1013 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 CLDN22Q8N7P3 220 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 HMGB4Q8WW32 186 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 SPRYD4Q8WW59 207 aaPredicted RBP13.54□□□□□ -0.24
EPHB4-210ENST00000616502 DHRS9Q9BPW9 319 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 THSD1Q9NS62 852 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 IL36AQ9UHA7 158 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 POLHQ9Y253 713 aa13.54□□□□□ -0.24
EPHB4-210ENST00000616502 H3BSH0 61 aa13.53□□□□□ -0.24
EPHB4-210ENST00000616502 PLA2G10O15496 165 aa13.53□□□□□ -0.24
EPHB4-210ENST00000616502 C1GALT1C1LP0DN25 315 aa13.53□□□□□ -0.24
EPHB4-210ENST00000616502 ARAFP10398 606 aa13.53□□□□□ -0.24
EPHB4-210ENST00000616502 SAGP10523 405 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-210ENST00000616502 KELP23276 732 aa13.53□□□□□ -0.24
EPHB4-210ENST00000616502 ELAVL4P26378 380 aaKnown RBP13.53□□□□□ -0.24
EPHB4-210ENST00000616502 FABP5Q01469 135 aa13.53□□□□□ -0.24
EPHB4-210ENST00000616502 DBPQ10586 325 aaPredicted RBP13.53□□□□□ -0.24
EPHB4-210ENST00000616502 SP140Q13342 867 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms