RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 CAPZA2P47755 286 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 DHPSP49366 369 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 ZNF81P51508 661 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SGSHP51688 502 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 OR4D2P58180 307 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TSPAN5P62079 268 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 IL1RL1Q01638 556 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 MLLT11Q13015 90 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 MAD2L1Q13257 205 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 C1DQ13901 141 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 CAPRIN1Q14444 709 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 PAFAH1B3Q15102 231 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 ZMYND11Q15326 602 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.8□□□□□ -1.64
SSX9-202ENST00000608568 HFEQ30201 348 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TTLL9Q3SXZ7 439 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 FNDC3BQ53EP0 1204 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 SPIN4Q56A73 249 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PYDC2Q56P42 97 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 XKR7Q5GH72 579 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 C3orf38Q5JPI3 329 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PCID2Q5JVF3 399 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 HECTD3Q5T447 861 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 FAM102AQ5T9C2 384 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 MANEALQ5VSG8 457 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 KCTD11Q693B1 232 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 KIAA0930Q6ICG6 404 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 SLC25A25Q6KCM7 469 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PSAPL1Q6NUJ1 521 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ZNF549Q6P9A3 640 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 BHLHB9Q6PI77 547 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 FIGNL1Q6PIW4 674 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 VHLLQ6RSH7 139 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SEZ6L2Q6UXD5 910 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PAMR1Q6UXH9 720 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 CYHR1Q6ZMK1 362 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 MSANTD1Q6ZTZ1 278 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ZER1Q7Z7L7 766 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 IFNEQ86WN2 208 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 CACUL1Q86Y37 369 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SLC41A1Q8IVJ1 513 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SLC44A2Q8IWA5 706 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 SULF2Q8IWU5 870 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PDZD9Q8IXQ8 264 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TMEFF1Q8IYR6 380 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ENTHD1Q8IYW4 607 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ADGRG2Q8IZP9 1017 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SPAG16Q8N0X2 631 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 CAMKK1Q8N5S9 505 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 DNAAF3Q8N9W5 541 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 C2CD4AQ8NCU7 369 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 OR8D4Q8NGM9 314 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 RNASE11Q8TAA1 199 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 WFDC5Q8TCV5 224 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SFT2D1Q8WV19 159 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 HEXDCQ8WVB3 486 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 RXFP2Q8WXD0 754 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ASB12Q8WXK4 309 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 GGHQ92820 318 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 FAM162AQ96A26 154 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ULK4Q96C45 1275 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ORAI1Q96D31 301 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SIPA1Q96FS4 1042 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 TMEM68Q96MH6 324 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ZNF583Q96ND8 569 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 FCRL3Q96P31 734 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 UBL7Q96S82 380 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 PEBP4Q96S96 227 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ZBTB18Q99592 522 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PIP5K1AQ99755 562 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 H2AFJQ9BTM1 129 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 C1QTNF3Q9BXJ4 246 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 NKX6-2Q9C056 277 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 ZDHHC5Q9C0B5 715 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 ALX4Q9H161 411 aaPredicted RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 OR51E2Q9H255 320 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SLC25A32Q9H2D1 315 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 MIXL1Q9H2W2 232 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 RIBC2Q9H4K1 309 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PPP1R3EQ9H7J1 279 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 DDX31Q9H8H2 851 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 CSNK1G1Q9HCP0 422 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 GSN-AS1Q9NRJ2 163 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 NDUFB11Q9NX14 153 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SPHK1Q9NYA1 384 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 HCN3Q9P1Z3 774 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 MYEF2Q9P2K5 600 aaKnown RBP4.8□□□□□ -1.64
SSX9-202ENST00000608568 AASSQ9UDR5 926 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 KLF15Q9UIH9 416 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 IKZF3Q9UKT9 509 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 POMT2Q9UKY4 750 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PCOLCE2Q9UKZ9 415 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SCML1Q9UN30 329 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 WASF3Q9UPY6 502 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 DYRK1BQ9Y463 629 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 PCDHGC4Q9Y5F7 938 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 DNAJC15Q9Y5T4 150 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 NBASA2RRP1 2371 aa4.8□□□□□ -1.64
SSX9-202ENST00000608568 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
SSX9-202ENST00000608568 IGHV1OR15-9A0A0B4J2B8 117 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms