RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 UNQ6126/PRO20091Q6UXV3 157 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 C6orf120Q7Z4R8 191 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 VWA5B2Q8N398 1253 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 CCDC71LQ8N9Z2 235 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 PTERQ96BW5 349 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 ZDHHC12Q96GR4 267 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 PRTFDC1Q9NRG1 225 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 WRAP73Q9P2S5 460 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 ATXN7L1Q9ULK2 861 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF407Q9C0G0 2248 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 A0A0U1RQK1 487 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 A6NLC8 198 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 CAPNS1P04632 268 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 DCNP07585 359 aaKnown RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 CSF1P09603 554 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 HRH2P25021 359 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 NNATQ16517 81 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 C14orf28Q4W4Y0 310 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 OR52E2Q8NGJ4 325 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 SNAPC3Q92966 411 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 SLC6A16Q9GZN6 736 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 GPR52Q9Y2T5 361 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 DOCK11Q5JSL3 2073 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 ANKRD33BA6NCL7 494 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 SSTR4P31391 388 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 THBS2P35442 1172 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 TMEM115Q12893 351 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 NOXA1Q86UR1 476 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF100Q8IYN0 542 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 HINT2Q9BX68 163 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 CACNG2Q9Y698 323 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 COL14A1Q05707 1796 aaKnown RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 C2orf74A8MZ97 194 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 CRTAPO75718 401 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF791Q3KP31 576 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-217ENST00000602723 TMEM35AQ53FP2 167 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 PLBD1Q6P4A8 553 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 TRAPPC6BQ86SZ2 158 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 SMG9Q9H0W8 520 aaKnown RBP9.15□□□□□ -0.95
CSMD1-217ENST00000602723 TMEM100Q9NV29 134 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 LSM5Q9Y4Y9 91 aaKnown RBP9.15□□□□□ -0.95
CSMD1-217ENST00000602723 NUBP2Q9Y5Y2 271 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 KLHL33A6NCF5 533 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF736B4DX44 427 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF701M0R085 212 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-217ENST00000602723 HLA-EP13747 358 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 GGT2P36268 569 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 SGSHP51688 502 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 OR4D2P58180 307 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 CRYZQ08257 329 aaKnown RBP9.15□□□□□ -0.95
CSMD1-217ENST00000602723 LCN8Q6JVE9 175 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 SPRYD4Q8WW59 207 aaPredicted RBP9.15□□□□□ -0.95
CSMD1-217ENST00000602723 GNG13Q9P2W3 67 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 ASB4Q9Y574 426 aa9.15□□□□□ -0.95
CSMD1-217ENST00000602723 RETP07949 1114 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 NUDT7P0C024 238 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 CD6P30203 668 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 CDK3Q00526 305 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 DEFB134Q4QY38 66 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 AGAP7PQ5VUJ5 663 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 AGAP6Q5VW22 663 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF486Q96H40 463 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 MYRFLQ96LU7 910 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 FCRL3Q96P31 734 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 AGAP4Q96P64 663 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 NRP1O14786 923 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 LYRM1O43325 122 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 C6P13671 934 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 UGT2B7P16662 529 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 HNRNPFP52597 415 aaKnown RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF136P52737 540 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 PROX2Q3B8N5 592 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 GLYATL1Q969I3 302 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF334Q9HCZ1 680 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 AIG1Q9NVV5 245 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 CA5AP35218 305 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF805Q5CZA5 627 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 SFRP4Q6FHJ7 346 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 FRZBQ92765 325 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 LMF1Q96S06 567 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 NPY6RQ99463 290 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 SRA1Q9HD15 236 aaKnown RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 ENPP5Q9UJA9 477 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 IGKV6D-41A0A0C4DH26 115 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 ZNF487B1APH4 448 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 SLC22A5O76082 557 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 RNH1P13489 461 aaKnown RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 POLR2CP19387 275 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 CCINQ13939 588 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 BOLLQ8N9W6 283 aaKnown RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 IL17RCQ8NAC3 791 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 LMX1AQ8TE12 382 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 NAA11Q9BSU3 229 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 HRASLS2Q9NWW9 162 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 ARGFXA6NJG6 315 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 USP2O75604 605 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-217ENST00000602723 LEFTY1O75610 366 aa9.14□□□□□ -0.95
CSMD1-217ENST00000602723 GAAP10253 952 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms