RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 HSF1Q00613 529 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 PSG6Q00889 435 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 TMEM198Q66K66 360 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 TMEM81Q6P7N7 255 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 PAOXQ6QHF9 649 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 SPATA19Q7Z5L4 167 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 CAMKMTQ7Z624 323 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 PIWIL2Q8TC59 973 aaKnown RBP15.46■□□□□ 0.07
TRIM28-215ENST00000601150 LRRC8CQ8TDW0 803 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 SSC4DQ8WTU2 575 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 NUDT8Q8WV74 236 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 DYDC1Q8WWB3 177 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 OR5P2Q8WZ92 322 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 SLC35A4Q96G79 324 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 ZNF597Q96LX8 424 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 RILPQ96NA2 401 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 DPY30Q9C005 99 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 BHLHE41Q9C0J9 482 aaPredicted RBP15.46■□□□□ 0.07
TRIM28-215ENST00000601150 DEFB127Q9H1M4 99 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 METTL7AQ9H8H3 244 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 ZDHHC11Q9H8X9 412 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 EQTNQ9NQ60 294 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 NTMQ9P121 344 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 ERRFI1Q9UJM3 462 aaPredicted RBP15.46■□□□□ 0.07
TRIM28-215ENST00000601150 ZNF835Q9Y2P0 537 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 RELNP78509 3460 aa15.46■□□□□ 0.07
TRIM28-215ENST00000601150 LRRK2Q5S007 2527 aa15.46■□□□□ 0.06
TRIM28-215ENST00000601150 TRGV8A0A0C4DH27 118 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 LRRC3CA6NJW4 275 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 LRRTM2O43300 516 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 EMC8O43402 210 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 TSPAN2O60636 221 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 TRIM3O75382 744 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-215ENST00000601150 ABOP16442 354 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 IL12BP29460 328 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 MAGEA5P43359 124 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 PRKAG1P54619 331 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 CASP6P55212 293 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 PER3P56645 1201 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 MRPS22P82650 360 aaKnown RBP15.45■□□□□ 0.06
TRIM28-215ENST00000601150 SNTA1Q13424 505 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 EFR3AQ14156 821 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 PGS1Q32NB8 556 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 LSM12Q3MHD2 195 aaKnown RBP15.45■□□□□ 0.06
TRIM28-215ENST00000601150 CYP27C1Q4G0S4 372 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 C1QL3Q5VWW1 255 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 BICRALQ6AI39 1079 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 DESI1Q6ICB0 168 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 Q6ZPB1 254 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-215ENST00000601150 SZRD1Q7Z422 152 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 PACS2Q86VP3 889 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 SPPL2CQ8IUH8 684 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 NUP43Q8NFH3 380 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 RELTQ969Z4 430 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 TMCO6Q96DC7 493 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 JSRP1Q96MG2 331 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-215ENST00000601150 C7orf26Q96N11 449 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 MS4A4EQ96PG1 132 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 NODALQ96S42 347 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 ADOQ96SZ5 270 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 LMF2Q9BU23 707 aaKnown RBP15.45■□□□□ 0.06
TRIM28-215ENST00000601150 DUSP26Q9BV47 211 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 WDR55Q9H6Y2 383 aaPredicted RBP15.45■□□□□ 0.06
TRIM28-215ENST00000601150 Q9N2J8 555 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 PLSCR2Q9NRY7 297 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 INTS9Q9NV88 658 aaKnown RBP15.45■□□□□ 0.06
TRIM28-215ENST00000601150 B4GALT7Q9UBV7 327 aa15.45■□□□□ 0.06
TRIM28-215ENST00000601150 ZNF407Q9C0G0 2248 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 NUP214P35658 2090 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-215ENST00000601150 GOLGA8QA0A0J9YX86 632 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 A0A1B0GTH9 108 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 GOLGA8OA6NCC3 632 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 GOLGA8NF8WBI6 632 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 PDE9AO76083 593 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 EPHA3P29320 983 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 CA7P43166 264 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 MASP1P48740 699 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 PNLIPRP2P54317 469 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 PRR5P85299 388 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 VPS26BQ4G0F5 336 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 SLC30A6Q6NXT4 461 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 WDR53Q7Z5U6 358 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-215ENST00000601150 FGD2Q7Z6J4 655 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 CHERPQ8IWX8 916 aaKnown RBP15.44■□□□□ 0.06
TRIM28-215ENST00000601150 CDRT4Q8N9R6 151 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 OR4N2Q8NGD1 307 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 NTNG2Q96CW9 530 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 ZNF703Q9H7S9 590 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-215ENST00000601150 SIRT3Q9NTG7 399 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-215ENST00000601150 MRTO4Q9UKD2 239 aaKnown RBP15.44■□□□□ 0.06
TRIM28-215ENST00000601150 CBLCQ9ULV8 474 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 FREM3P0C091 2139 aa15.44■□□□□ 0.06
TRIM28-215ENST00000601150 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 PRAMEF25A6NGN4 478 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 ANKRD28O15084 1053 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 C6orf47O95873 294 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 LDLRP01130 860 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 ALDOCP09972 364 aaKnown RBP15.43■□□□□ 0.06
TRIM28-215ENST00000601150 RFPL3SP0C7P2 107 aa15.43■□□□□ 0.06
TRIM28-215ENST00000601150 GABRA3P34903 492 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms