RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SF3B4Q15427 424 aaKnown RBP eCLIP9.61□□□□□ -0.876e-12■■■■□ 23.9
CCDC9-203ENST00000596938 NNATQ16517 81 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 CYP27C1Q4G0S4 372 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 RFTN2Q52LD8 501 aaPredicted RBP9.61□□□□□ -0.87
CCDC9-203ENST00000596938 NHSL2Q5HYW2 709 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 C1orf185Q5T7R7 199 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 VASNQ6EMK4 673 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 DESI1Q6ICB0 168 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 SLC44A2Q8IWA5 706 aaPredicted RBP9.61□□□□□ -0.87
CCDC9-203ENST00000596938 PM20D2Q8IYS1 436 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 ULK2Q8IYT8 1036 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 OR2L13Q8N349 312 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 OR10Q1Q8NGQ4 319 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 OR1J4Q8NGS1 313 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 OR6Y1Q8NGX8 325 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 RNF138Q8WVD3 245 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 ELP4Q96EB1 424 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 AMDHD1Q96NU7 426 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 ADOQ96SZ5 270 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 CCT7Q99832 543 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 SLC6A15Q9H2J7 730 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 GLIPR2Q9H4G4 154 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 FOLH1BQ9HBA9 442 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 KCNJ16Q9NPI9 418 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 ALKBH4Q9NXW9 302 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 SENP1Q9P0U3 644 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 PTGDR2Q9Y5Y4 395 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 TACC2O95359 2948 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 C15orf38-AP3S2A0A0A6YYH1 394 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 PRAMEF25A6NGN4 478 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 TTC36A6NLP5 189 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 GNB5O14775 395 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 SNPHO15079 494 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 LSM1O15116 133 aaKnown RBP9.6□□□□□ -0.87
CCDC9-203ENST00000596938 TOXO94900 526 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 ACTL6AO96019 429 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 BPGMP07738 259 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 NTSP30990 170 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 KRT20P35900 424 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 ETV4P43268 484 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 ZFP36L2P47974 494 aaKnown RBP9.6□□□□□ -0.87
CCDC9-203ENST00000596938 MRPS22P82650 360 aaKnown RBP9.6□□□□□ -0.87
CCDC9-203ENST00000596938 PSG6Q00889 435 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 TFF3Q07654 80 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 CRYZQ08257 329 aaKnown RBP9.6□□□□□ -0.87
CCDC9-203ENST00000596938 RIPPLY2Q5TAB7 128 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 ANGPTL8Q6UXH0 198 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 NPSR1Q6W5P4 371 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 LARP4Q71RC2 724 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCDC9-203ENST00000596938 GDF7Q7Z4P5 450 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 PLCZ1Q86YW0 608 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 CCDC71Q8IV32 467 aaPredicted RBP9.6□□□□□ -0.87
CCDC9-203ENST00000596938 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 WDSUB1Q8N9V3 476 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 OR2T11Q8NH01 316 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 CDC26Q8NHZ8 85 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 MECRQ9BV79 373 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 OSBPL11Q9BXB4 747 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 TRIM8Q9BZR9 551 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 UCK2Q9BZX2 261 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 PRDM14Q9GZV8 571 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 REEP4Q9H6H4 257 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 GALNT9Q9HCQ5 603 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 KLRF1Q9NZS2 232 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 RAB21Q9UL25 225 aa9.6□□□□□ -0.87
CCDC9-203ENST00000596938 MRPS18CQ9Y3D5 142 aaKnown RBP9.6□□□□□ -0.87
CCDC9-203ENST00000596938 A0A0G2JNJ9 132 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 C2orf72A6NCS6 295 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 CTIFO43310 598 aaKnown RBP9.59□□□□□ -0.87
CCDC9-203ENST00000596938 NME6O75414 186 aaPredicted RBP9.59□□□□□ -0.87
CCDC9-203ENST00000596938 EPPINO95925 133 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 SNRPB2P08579 225 aaKnown RBP9.59□□□□□ -0.87
CCDC9-203ENST00000596938 CPN1P15169 458 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 CREB1P16220 341 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 IGFBP2P18065 325 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 BMP7P18075 431 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 SDC1P18827 310 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 IL12BP29460 328 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 SSTR2P30874 369 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 ADH7P40394 386 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 MC3RP41968 323 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 FRKP42685 505 aaPredicted RBP9.59□□□□□ -0.87
CCDC9-203ENST00000596938 ASMTP46597 345 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 GAB1Q13480 694 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 PDE7AQ13946 482 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 TOMM20Q15388 145 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 EIPR1Q53HC9 387 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 SH2D4BQ5SQS7 431 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 TMEM107Q6UX40 140 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 DDIASQ8IXT1 998 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 FAM83FQ8NEG4 500 aaPredicted RBP9.59□□□□□ -0.87
CCDC9-203ENST00000596938 OR4N2Q8NGD1 307 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 TWIST2Q8WVJ9 160 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 HOXB13Q92826 284 aaPredicted RBP9.59□□□□□ -0.87
CCDC9-203ENST00000596938 ABTB1Q969K4 478 aaPredicted RBP9.59□□□□□ -0.87
CCDC9-203ENST00000596938 PPCDCQ96CD2 204 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 MTERF3Q96E29 417 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 DTNBP1Q96EV8 351 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 C14orf79Q96F83 325 aa9.59□□□□□ -0.87
CCDC9-203ENST00000596938 WDYHV1Q96HA8 205 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms