RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TRPC4APQ8TEL6 797 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 TMBIM1Q969X1 311 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 CNRIP1Q96F85 164 aaPredicted RBP9.01□□□□□ -0.97
LIG1-209ENST00000596104 ZNF681Q96N22 645 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 COL21A1Q96P44 957 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 MED18Q9BUE0 208 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 NOL11Q9H8H0 719 aaKnown RBP9.01□□□□□ -0.97
LIG1-209ENST00000596104 ZBTB26Q9HCK0 441 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 ZNF226Q9NYT6 803 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 PRODH2Q9UF12 536 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 TRPS1Q9UHF7 1281 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 GPR55Q9Y2T6 319 aaPredicted RBP9.01□□□□□ -0.97
LIG1-209ENST00000596104 SAR1BQ9Y6B6 198 aa9.01□□□□□ -0.97
LIG1-209ENST00000596104 FBN1P35555 2871 aaKnown RBP9.01□□□□□ -0.97
LIG1-209ENST00000596104 FAM187AA6NFU0 413 aa9□□□□□ -0.97
LIG1-209ENST00000596104 SLC22A20A6NK97 555 aa9□□□□□ -0.97
LIG1-209ENST00000596104 C17orf51A8MQB3 221 aa9□□□□□ -0.97
LIG1-209ENST00000596104 TSPAN2O60636 221 aa9□□□□□ -0.97
LIG1-209ENST00000596104 ABCB7O75027 752 aa9□□□□□ -0.97
LIG1-209ENST00000596104 NME6O75414 186 aaPredicted RBP9□□□□□ -0.97
LIG1-209ENST00000596104 ERAL1O75616 437 aaKnown RBP9□□□□□ -0.97
LIG1-209ENST00000596104 REM1O75628 298 aa9□□□□□ -0.97
LIG1-209ENST00000596104 KLHL2O95198 593 aa9□□□□□ -0.97
LIG1-209ENST00000596104 CNOT4O95628 575 aaKnown RBP9□□□□□ -0.97
LIG1-209ENST00000596104 CT45A8P0DMV1 189 aa9□□□□□ -0.97
LIG1-209ENST00000596104 CT45A9P0DMV2 189 aa9□□□□□ -0.97
LIG1-209ENST00000596104 GRK2P25098 689 aa9□□□□□ -0.97
LIG1-209ENST00000596104 STX2P32856 288 aa9□□□□□ -0.97
LIG1-209ENST00000596104 PAFAH1B1P43034 410 aa9□□□□□ -0.97
LIG1-209ENST00000596104 PTH2RP49190 550 aa9□□□□□ -0.97
LIG1-209ENST00000596104 MRPS35P82673 323 aaKnown RBP9□□□□□ -0.97
LIG1-209ENST00000596104 PPP2R2BQ00005 443 aa9□□□□□ -0.97
LIG1-209ENST00000596104 GALNT1Q10472 559 aaPredicted RBP9□□□□□ -0.97
LIG1-209ENST00000596104 CALCOCO2Q13137 446 aa9□□□□□ -0.97
LIG1-209ENST00000596104 CT45A2Q5DJT8 189 aa9□□□□□ -0.97
LIG1-209ENST00000596104 TECRLQ5HYJ1 363 aa9□□□□□ -0.97
LIG1-209ENST00000596104 C10orf62Q5T681 223 aaPredicted RBP9□□□□□ -0.97
LIG1-209ENST00000596104 OR5M10Q6IEU7 315 aa9□□□□□ -0.97
LIG1-209ENST00000596104 OR2A2Q6IF42 318 aa9□□□□□ -0.97
LIG1-209ENST00000596104 FAM180BQ6P0A1 224 aa9□□□□□ -0.97
LIG1-209ENST00000596104 PAGE2Q7Z2X7 111 aa9□□□□□ -0.97
LIG1-209ENST00000596104 ZNF550Q7Z398 422 aa9□□□□□ -0.97
LIG1-209ENST00000596104 PTGR2Q8N8N7 351 aaPredicted RBP9□□□□□ -0.97
LIG1-209ENST00000596104 CNEP1R1Q8N9A8 125 aa9□□□□□ -0.97
LIG1-209ENST00000596104 FBF1Q8TES7 1133 aa9□□□□□ -0.97
LIG1-209ENST00000596104 FIG4Q92562 907 aa9□□□□□ -0.97
LIG1-209ENST00000596104 TM4SF18Q96CE8 201 aa9□□□□□ -0.97
LIG1-209ENST00000596104 TMCO6Q96DC7 493 aa9□□□□□ -0.97
LIG1-209ENST00000596104 PGM2Q96G03 612 aa9□□□□□ -0.97
LIG1-209ENST00000596104 NSUN5Q96P11 429 aaKnown RBP9□□□□□ -0.97
LIG1-209ENST00000596104 FAM111AQ96PZ2 611 aa9□□□□□ -0.97
LIG1-209ENST00000596104 BTBD9Q96Q07 612 aa9□□□□□ -0.97
LIG1-209ENST00000596104 ADOQ96SZ5 270 aa9□□□□□ -0.97
LIG1-209ENST00000596104 NTMT1Q9BV86 223 aa9□□□□□ -0.97
LIG1-209ENST00000596104 OPN3Q9H1Y3 402 aaPredicted RBP9□□□□□ -0.97
LIG1-209ENST00000596104 ELOVL5Q9NYP7 299 aa9□□□□□ -0.97
LIG1-209ENST00000596104 AHSPQ9NZD4 102 aa9□□□□□ -0.97
LIG1-209ENST00000596104 CPSF2Q9P2I0 782 aaKnown RBP9□□□□□ -0.97
LIG1-209ENST00000596104 DKKL1Q9UK85 242 aa9□□□□□ -0.97
LIG1-209ENST00000596104 PCTPQ9UKL6 214 aa9□□□□□ -0.97
LIG1-209ENST00000596104 A0A096LPK6 155 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 H0YC42 278 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 C16orf97H3BN30 126 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 EMC8O43402 210 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 RAD51CO43502 376 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 GUCY1B2O75343 617 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 ALDOAP04075 364 aaKnown RBP8.99□□□□□ -0.97
LIG1-209ENST00000596104 CTAGE8P0CG41 777 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 CD8BP10966 210 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 POU2F1P14859 743 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 PAX1P15863 534 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 TCEA1P23193 301 aaKnown RBP8.99□□□□□ -0.97
LIG1-209ENST00000596104 DPP4P27487 766 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 DEKP35659 375 aaKnown RBP8.99□□□□□ -0.97
LIG1-209ENST00000596104 MAGEA4P43358 317 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 CCNG1P51959 295 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 TPD52P55327 224 aaPredicted RBP8.99□□□□□ -0.97
LIG1-209ENST00000596104 CORO7P57737 925 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 GNG11P61952 73 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 SIRPAP78324 504 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 GUCY2DQ02846 1103 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 KRTAP1-1Q07627 177 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 CAPRIN1Q14444 709 aaKnown RBP8.99□□□□□ -0.97
LIG1-209ENST00000596104 GUSBP1Q15486 140 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 GGTA1PQ4G0N0 100 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 ZNF628Q5EBL2 1059 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 MROH9Q5TGP6 573 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 FAM219BQ5XKK7 198 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 NPSR1Q6W5P4 371 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 P4HA3Q7Z4N8 544 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 CTAGE4Q8IX94 777 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 PLD6Q8N2A8 252 aaKnown RBP8.99□□□□□ -0.97
LIG1-209ENST00000596104 GBP7Q8N8V2 638 aaPredicted RBP8.99□□□□□ -0.97
LIG1-209ENST00000596104 FADS6Q8N9I5 356 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 ZNF610Q8N9Z0 462 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 LRRN4CLQ8ND94 238 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 ZNF675Q8TD23 568 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 ATP6V1E2Q96A05 226 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 KLHL29Q96CT2 875 aa8.99□□□□□ -0.97
LIG1-209ENST00000596104 DTNBP1Q96EV8 351 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms