RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 SLC16A11Q8NCK7 471 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 COL26A1Q96A83 441 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 ZG16BQ96DA0 208 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 LGALS12Q96DT0 336 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 SLCO1B1Q9Y6L6 691 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 OCA2Q04671 838 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 FZD5Q13467 585 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 FRRS1Q6ZNA5 592 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 SLC46A3Q7Z3Q1 461 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 WDR53Q7Z5U6 358 aaPredicted RBP18.43■□□□□ 0.54
CLIP3-206ENST00000593074 IQCHQ86VS3 1027 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 ZNF655Q8N720 491 aaPredicted RBP18.43■□□□□ 0.54
CLIP3-206ENST00000593074 PLEKHA8Q96JA3 519 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 GPR55Q9Y2T6 319 aaPredicted RBP18.43■□□□□ 0.54
CLIP3-206ENST00000593074 ENTPD6O75354 484 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 PORP16435 677 aaPredicted RBP18.42■□□□□ 0.54
CLIP3-206ENST00000593074 OPRL1P41146 370 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 OLR1P78380 273 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 DGUOKQ16854 277 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 ZNF628Q5EBL2 1059 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 ENTPD8Q5MY95 495 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 PLAG1Q6DJT9 500 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 ZNF367Q7RTV3 350 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 PRSS41Q7RTY9 318 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 OR4N5Q8IXE1 308 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 OR8J1Q8NGP2 316 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 ZDHHC1Q8WTX9 485 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 DIO2Q92813 273 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 Q96MT0 163 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 IL4I1Q96RQ9 567 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 IL21RQ9HBE5 538 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 SLC13A4Q9UKG4 626 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 DNAH14Q0VDD8 3507 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 ZNF860A6NHJ4 632 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 FAM170BA6NMN3 283 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 EFCAB9A8MZ26 197 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 FCMRO60667 390 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 ADRA2AP08913 450 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 HHEXQ03014 270 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 FHL5Q5TD97 284 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 PTCRAQ6ISU1 281 aaPredicted RBP18.42■□□□□ 0.54
CLIP3-206ENST00000593074 CASP12Q6UXS9 341 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 RBM12BQ8IXT5 1001 aaKnown RBP18.42■□□□□ 0.54
CLIP3-206ENST00000593074 CDS1Q92903 461 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 SH3YL1Q96HL8 342 aaPredicted RBP18.42■□□□□ 0.54
CLIP3-206ENST00000593074 ANKRD19PQ9H560 264 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 CORINQ9Y5Q5 1042 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 PMF1-BGLAPU3KQ54 211 aa18.42■□□□□ 0.54
CLIP3-206ENST00000593074 OR5K3A6NET4 321 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 ATP1B1P05026 303 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 EIF2S1P05198 315 aaKnown RBP18.41■□□□□ 0.54
CLIP3-206ENST00000593074 SERPINB10P48595 397 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 TAS2R41P59536 307 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 LSM11P83369 360 aaKnown RBP eCLIP18.41■□□□□ 0.54
CLIP3-206ENST00000593074 ARHGAP11BQ3KRB8 267 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 DEFB119Q8N690 84 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 SIMC1Q8NDZ2 872 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 OR52P1PQ8NH57 321 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 GPA33Q99795 319 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 TRIM45Q9H8W5 580 aaPredicted RBP18.41■□□□□ 0.54
CLIP3-206ENST00000593074 CTPS2Q9NRF8 586 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 OSGIN1Q9UJX0 560 aa18.41■□□□□ 0.54
CLIP3-206ENST00000593074 C19orf53Q9UNZ5 99 aaPredicted RBP18.41■□□□□ 0.54
CLIP3-206ENST00000593074 METTL12A8MUP2 240 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 CYR61O00622 381 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 AIREO43918 545 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 GALR3O60755 368 aaPredicted RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 CNOT3O75175 753 aaKnown RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 NADKO95544 446 aaPredicted RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 TNNI3P19429 210 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 GSTM3P21266 225 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 GADD45AP24522 165 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 CD27P26842 260 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 PPP1CAP62136 330 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 DUSP5Q16690 384 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 EXOSC6Q5RKV6 272 aaKnown RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 ARMC6Q6NXE6 501 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 OOSP2Q86WS3 158 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 ZNF761Q86XN6 746 aaPredicted RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 CSNK1A1LQ8N752 337 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 LRRC61Q9BV99 259 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 ALOXE3Q9BYJ1 711 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 AKIP1Q9NQ31 210 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 KLHL28Q9NXS3 571 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 TAS2R16Q9NYV7 291 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 SPACA6W5XKT8 324 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 A0A087WUU8 490 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 KRBA1A5PL33 1030 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 FRS3O43559 492 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 CYP7B1O75881 506 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 ACP2P11117 423 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 OCLNQ16625 522 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 MFSD4BQ5TF39 518 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 MEDAGQ5VYS4 303 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 TYW3Q6IPR3 259 aaKnown RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 TMEFF1Q8IYR6 380 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 SLC9A6Q92581 669 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 ZHX1-C8orf76Q96EF9 292 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 POLDIP3Q9BY77 421 aaKnown RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 SLIRPQ9GZT3 109 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms