RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 SLC9A6Q92581 669 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 HAS2Q92819 552 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 SLC35A4Q96G79 324 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 SMAD5Q99717 465 aaKnown RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 GPATCH1Q9BRR8 931 aaKnown RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 BTBD2Q9BX70 525 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 RNF32Q9H0A6 362 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 NXF5Q9H1B4 397 aaKnown RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 NANOGQ9H9S0 305 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 LIN28AQ9H9Z2 209 aaKnown RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 Q9N2J8 555 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 EXD2Q9NVH0 621 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 NDE1Q9NXR1 346 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 MRTO4Q9UKD2 239 aaKnown RBP11.25□□□□□ -0.61
DNMT1-218ENST00000589294 LOC400499M0QZD8 3231 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 ITPR1Q14643 2758 aa11.25□□□□□ -0.61
DNMT1-218ENST00000589294 C15orf38-AP3S2A0A0A6YYH1 394 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 FXYD1O00168 92 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 NME6O75414 186 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-218ENST00000589294 GUSBP08236 651 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 T-ENOLP0DO92 83 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 ACP2P11117 423 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 PIGAP37287 484 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 KHKP50053 298 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 HLCSP50747 726 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 SSR4P51571 173 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 MVDP53602 400 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 CORO7P57737 925 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 RHDQ02161 417 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 MFAP5Q13361 173 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 RGNQ15493 299 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 DUSP5Q16690 384 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 ST3GAL2Q16842 350 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 ATAD3BQ5T9A4 648 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 AP1ARQ63HQ0 302 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 B3GNTL1Q67FW5 361 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-218ENST00000589294 FCRLBQ6BAA4 426 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 C8orf82Q6P1X6 216 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-218ENST00000589294 IGFL3Q6UXB1 125 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 ANGPTL8Q6UXH0 198 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 NPSR1Q6W5P4 371 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 ARPINQ7Z6K5 226 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 HPS6Q86YV9 775 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 SLC34A3Q8N130 599 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 FAM110BQ8TC76 370 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 JADE3Q92613 823 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 EXTL1Q92935 676 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 AURKBQ96GD4 344 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-218ENST00000589294 SGCZQ96LD1 299 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 OR7D2Q96RA2 312 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 RASL10BQ96S79 203 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 CPPED1Q9BRF8 314 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-218ENST00000589294 YIPF4Q9BSR8 244 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 THUMPD3Q9BV44 507 aaKnown RBP11.24□□□□□ -0.61
DNMT1-218ENST00000589294 ADNPQ9H2P0 1102 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 OR51I1Q9H343 314 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 TRIM45Q9H8W5 580 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-218ENST00000589294 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-218ENST00000589294 TUBD1Q9UJT1 453 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 CBLCQ9ULV8 474 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 LIPT1Q9Y234 373 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 OR10H1Q9Y4A9 318 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 NPFFR2Q9Y5X5 522 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 DOCK10Q96BY6 2186 aa11.24□□□□□ -0.61
DNMT1-218ENST00000589294 USP24Q9UPU5 2620 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 B2RBV5 119 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 HMGN4O00479 90 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 MAN1A2O60476 641 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 ABCB7O75027 752 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 ATP5HO75947 161 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 CBX6O95503 412 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 NADKO95544 446 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 AK1P00568 194 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 C1QCP02747 245 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 FBXO45P0C2W1 286 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 OR12D1P0DN82 309 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 BMP2P12643 396 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 SLC6A2P23975 617 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 ABCD3P28288 659 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 LCN1P31025 176 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 CRATP43155 626 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 TMED10P49755 219 aaKnown RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 NUDT2P50583 147 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 PNLIPRP2P54317 469 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 PSMD4P55036 377 aaKnown RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 POLE2P56282 527 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 RPS26P62854 115 aaKnown RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 POU6F2P78424 691 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 MRPS22P82650 360 aaKnown RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 RAPSNQ13702 412 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 GNA13Q14344 377 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 CAPRIN1Q14444 709 aaKnown RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 DECR1Q16698 335 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 ZNF791Q3KP31 576 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 ARHGAP11BQ3KRB8 267 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 COX20Q5RI15 118 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 HEPHL1Q6MZM0 1159 aa11.23□□□□□ -0.61
DNMT1-218ENST00000589294 TNFAIP8L2Q6P589 184 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-218ENST00000589294 C16orf47Q6ZP98 133 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms