RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ZNF681Q96N22 645 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 SFXN2Q96NB2 322 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 NSUN5Q96P11 429 aaKnown RBP12.74□□□□□ -0.37
DNMT1-213ENST00000587604 FAIM2Q9BWQ8 316 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 VPS11Q9H270 941 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 FBXL2Q9UKC9 423 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 WIF1Q9Y5W5 379 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 ZNF780BQ9Y6R6 833 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 RTTNQ86VV8 2226 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 A0A1W2PNV4 684 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 CTIFO43310 598 aaKnown RBP12.73□□□□□ -0.37
DNMT1-213ENST00000587604 HCRTR2O43614 444 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 ZIC3O60481 467 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 SMPD2O60906 423 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 REM1O75628 298 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 BCAS2O75934 225 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-213ENST00000587604 TGM6O95932 706 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 PCSK2P16519 638 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 CPOXP36551 454 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 MC3RP41968 323 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 TRA2BP62995 288 aaKnown RBP12.73□□□□□ -0.37
DNMT1-213ENST00000587604 MRPS35P82673 323 aaKnown RBP12.73□□□□□ -0.37
DNMT1-213ENST00000587604 DUSP2Q05923 314 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 FAM27E3Q08E93 113 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 LTB4RQ15722 352 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 UAP1Q16222 522 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-213ENST00000587604 BCL2A1Q16548 175 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 Q5PR19 223 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 PRSS57Q6UWY2 283 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 GBP7Q8N8V2 638 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-213ENST00000587604 OR4F6Q8NGB9 312 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 ZNF675Q8TD23 568 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 STARD4Q96DR4 205 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 WFIKKN1Q96NZ8 548 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 BTBD9Q96Q07 612 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 ADOQ96SZ5 270 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 BRF2Q9HAW0 419 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 FARSBQ9NSD9 589 aaKnown RBP12.73□□□□□ -0.37
DNMT1-213ENST00000587604 NMRK1Q9NWW6 199 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 ZNF226Q9NYT6 803 aa12.73□□□□□ -0.37
DNMT1-213ENST00000587604 C6orf203Q9P0P8 240 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-213ENST00000587604 TSPAN2O60636 221 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 SMIM24O75264 130 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 LY6G6DO95868 133 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 OTCP00480 354 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 PDYNP01213 254 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 CT45A8P0DMV1 189 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 CT45A9P0DMV2 189 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 ALDH9A1P49189 494 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 PSPHP78330 225 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 EFR3AQ14156 821 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 CT45A2Q5DJT8 189 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 ZNF628Q5EBL2 1059 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 OR2A2Q6IF42 318 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 FAM180BQ6P0A1 224 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 TAOK1Q7L7X3 1001 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 CHMP1BQ7LBR1 199 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 P4HA3Q7Z4N8 544 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 CCDC116Q8IYX3 515 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 SELENOMQ8WWX9 145 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 ERP27Q96DN0 273 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 COX4I2Q96KJ9 171 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 UTS2RQ9UKP6 389 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 SNX6Q9UNH7 406 aa12.72□□□□□ -0.37
DNMT1-213ENST00000587604 DEFB108AA8MXU0 73 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 SIAH2O43255 324 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.37
DNMT1-213ENST00000587604 FPR1P21462 350 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 GRK2P25098 689 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 DPP4P27487 766 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 PHBP35232 272 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 CD79BP40259 229 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 MAGEA12P43365 314 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 PNLIPRP2P54317 469 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 GAS1P54826 345 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 B3GALT5-AS1P59052 145 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 ACKR1Q16570 336 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 OR5M10Q6IEU7 315 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 ZNF474Q6S9Z5 364 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-213ENST00000587604 CIARTQ8N365 385 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-213ENST00000587604 C1orf52Q8N6N3 182 aaKnown RBP12.71□□□□□ -0.37
DNMT1-213ENST00000587604 CNEP1R1Q8N9A8 125 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 NUDT8Q8WV74 236 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 RNF138Q8WVD3 245 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 BDH2Q9BUT1 245 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 ACSS3Q9H6R3 686 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 KLHL28Q9NXS3 571 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 ELOVL5Q9NYP7 299 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 XPR1Q9UBH6 696 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 HEY2Q9UBP5 337 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 VPS29Q9UBQ0 182 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 DKKL1Q9UK85 242 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 USF3Q68DE3 2245 aa12.71□□□□□ -0.37
DNMT1-213ENST00000587604 COL6A5A8TX70 2615 aa12.71□□□□□ -0.38
DNMT1-213ENST00000587604 SLC22A20A6NK97 555 aa12.7□□□□□ -0.38
DNMT1-213ENST00000587604 H7C1Q1 480 aa12.7□□□□□ -0.38
DNMT1-213ENST00000587604 PPP6CO00743 305 aa12.7□□□□□ -0.38
DNMT1-213ENST00000587604 ESRRBO95718 433 aa12.7□□□□□ -0.38
DNMT1-213ENST00000587604 RPS17P08708 135 aaKnown RBP12.7□□□□□ -0.38
DNMT1-213ENST00000587604 COL6A2P12110 1019 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms