RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PABPC4LP0CB38 370 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 CD59P13987 128 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 CD247P20963 164 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 RRM2P31350 389 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 SLC5A2P31639 672 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 PTGER1P34995 402 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 NBL1P41271 181 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 FOLR3P41439 243 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 TMED10P49755 219 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 RAD23AP54725 363 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 NRG3P56975 720 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 BTG2P78543 158 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 DUSP2Q05923 314 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 ZFP36L1Q07352 338 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 MED21Q13503 144 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 ERV3-1Q14264 604 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 MYBPC3Q14896 1274 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 C16orf72Q14CZ0 275 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 EXOSC7Q15024 291 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 TRIP6Q15654 476 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 ADRM1Q16186 407 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 SYPL1Q16563 259 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 PRSS53Q2L4Q9 553 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 RFX4Q33E94 735 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 ARHGAP11BQ3KRB8 267 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 FLYWCH1Q4VC44 716 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 TRMT12Q53H54 448 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 ZNF311Q5JNZ3 666 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 RPS26P11Q5JNZ5 115 aaPredicted RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 LPCAT4Q643R3 524 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 OR2T5Q6IEZ7 315 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 KRT80Q6KB66 452 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 PWWP2BQ6NUJ5 590 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 MED25Q71SY5 747 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 TMPRSS9Q7Z410 1059 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 AMIGO2Q86SJ2 522 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 KBTBD2Q8IY47 623 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 PRSS58Q8IYP2 241 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 ZNF619Q8N2I2 560 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 ZNF614Q8N883 585 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 ANKFN1Q8N957 763 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 MORN4Q8NDC4 146 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 TMEM52Q8NDY8 209 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 ZNF555Q8NEP9 628 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 OR2T29Q8NH02 315 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 OR5K1Q8NHB7 308 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 WDR36Q8NI36 951 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 STT3BQ8TCJ2 826 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 PHF10Q8WUB8 498 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 OIT3Q8WWZ8 545 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 UCN3Q969E3 161 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 RMND5BQ96G75 393 aaPredicted RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 FBXL20Q96IG2 436 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 LRFN5Q96NI6 719 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 SLC46A1Q96NT5 459 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 BTBD9Q96Q07 612 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 TAAR9Q96RI9 348 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 GAL3ST4Q96RP7 486 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 LPAR4Q99677 370 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 CIB1Q99828 191 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 CTRCQ99895 268 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 RBM4BQ9BQ04 359 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 TREX2Q9BQ50 279 aaPredicted RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 LRFN3Q9BTN0 628 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 DDA1Q9BW61 102 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 RBM4Q9BWF3 364 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 COL25A1Q9BXS0 654 aaPredicted RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 ZNF556Q9HAH1 456 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 FOLH1BQ9HBA9 442 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 BCL2L10Q9HD36 194 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 IL1RAPQ9NPH3 570 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 C11orf16Q9NQ32 467 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 OCIAD1Q9NX40 245 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 SELENONQ9NZV5 590 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 NTMQ9P121 344 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 PISDQ9UG56 409 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 C3orf18Q9UK00 162 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 OAZ3Q9UMX2 235 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 LRCH1Q9Y2L9 728 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 SH3GLB1Q9Y371 365 aa5.77□□□□□ -1.49
LIG3-206ENST00000586058 SAMHD1Q9Y3Z3 626 aaKnown RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 GPC6Q9Y625 555 aaPredicted RBP5.77□□□□□ -1.49
LIG3-206ENST00000586058 NCOR1O75376 2440 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 IGLV3-12A0A075B6K2 115 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 MYOCOSA0A1B0GUC4 107 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 C2orf92A0A1B0GVN3 265 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 A0A1W2PS29 197 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 TCRBV16S1A1N1A0A5B0 115 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 FAM149AA5PLN7 773 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 SAGE2PA6NJ88 616 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 A8MUA0 341 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 H3BMH7 237 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 H3BNH8 94 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 MEN1O00255 615 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 SYT5O00445 386 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 SCDO00767 359 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 CDX4O14627 284 aaPredicted RBP5.76□□□□□ -1.49
LIG3-206ENST00000586058 PLD2O14939 933 aa5.76□□□□□ -1.49
LIG3-206ENST00000586058 TPD52L2O43399 206 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms