RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 SLC48A1Q6P1K1 146 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 METTL2BQ6P1Q9 378 aaKnown RBP12.05□□□□□ -0.48
COPS3-218ENST00000584216 CYS1Q717R9 158 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 CCDC91Q7Z6B0 441 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 LRRC8AQ8IWT6 810 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 PHC2Q8IXK0 858 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 L3MBTL4Q8NA19 623 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 OR52R1Q8NGF1 315 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 RHEBL1Q8TAI7 183 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 WDR20Q8TBZ3 569 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 TRPC4APQ8TEL6 797 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 GFM2Q969S9 779 aaKnown RBP12.05□□□□□ -0.48
COPS3-218ENST00000584216 TMBIM1Q969X1 311 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 SLC35A4Q96G79 324 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 PIGQQ9BRB3 760 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 STMN4Q9H169 189 aaPredicted RBP12.05□□□□□ -0.48
COPS3-218ENST00000584216 RNF122Q9H9V4 155 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 SMYD2Q9NRG4 433 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 MAT2BQ9NZL9 334 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 ZNF639Q9UID6 485 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 PLLPQ9Y342 182 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 TLN2Q9Y4G6 2542 aa12.05□□□□□ -0.48
COPS3-218ENST00000584216 ERAL1O75616 437 aaKnown RBP12.04□□□□□ -0.48
COPS3-218ENST00000584216 PIAS1O75925 651 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 SOX30O94993 753 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 CLDN9O95484 217 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 CGAP01215 116 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 KLK1P06870 262 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 GRK2P25098 689 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 IDUAP35475 653 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 ALDH18A1P54886 795 aaKnown RBP12.04□□□□□ -0.48
COPS3-218ENST00000584216 RPS3AP61247 264 aaKnown RBP12.04□□□□□ -0.48
COPS3-218ENST00000584216 KRTAP1-1Q07627 177 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 GTF2H2Q13888 395 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 GANABQ14697 944 aaKnown RBP12.04□□□□□ -0.48
COPS3-218ENST00000584216 SLMAPQ14BN4 828 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 EXOSC7Q15024 291 aaKnown RBP12.04□□□□□ -0.48
COPS3-218ENST00000584216 PFKFB4Q16877 469 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 FAM83EQ2M2I3 478 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 GRTP1Q5TC63 336 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 RAET1LQ5VY80 246 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 GTF2H2CQ6P1K8 395 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 HIPK1Q86Z02 1210 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 ZNF610Q8N9Z0 462 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 ADOQ96SZ5 270 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 PINK1Q9BXM7 581 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 IPPKQ9H8X2 491 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 HEY2Q9UBP5 337 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 ACOT9Q9Y305 439 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 EMC9Q9Y3B6 208 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 PCDHA9Q9Y5H5 950 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 ZNF780BQ9Y6R6 833 aa12.04□□□□□ -0.48
COPS3-218ENST00000584216 CXorf49A8MYA2 514 aaPredicted RBP12.03□□□□□ -0.48
COPS3-218ENST00000584216 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 ZIC3O60481 467 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 CBX7O95931 251 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 NID1P14543 1247 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 TCP1P17987 556 aaKnown RBP12.03□□□□□ -0.48
COPS3-218ENST00000584216 TCEA1P23193 301 aaKnown RBP12.03□□□□□ -0.48
COPS3-218ENST00000584216 FEN1P39748 380 aaKnown RBP12.03□□□□□ -0.48
COPS3-218ENST00000584216 GPX6P59796 221 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 MGAT2Q10469 447 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 PON3Q15166 354 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 EXOC3L2Q2M3D2 409 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 ANKRD34AQ69YU3 496 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 TTC19Q6DKK2 380 aaPredicted RBP12.03□□□□□ -0.48
COPS3-218ENST00000584216 OR5M10Q6IEU7 315 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 FAM111BQ6SJ93 734 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 CTAGE3PQ8IX95 158 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 KLHL7Q8IXQ5 586 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 FIG4Q92562 907 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 ATP6V1E2Q96A05 226 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 KLHL29Q96CT2 875 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 BTBD9Q96Q07 612 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 FAIM2Q9BWQ8 316 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 REG4Q9BYZ8 158 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 TRIM31Q9BZY9 425 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 PTGES2Q9H7Z7 377 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 SDHAF3Q9NRP4 125 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 PPP4R1LQ9P1A2 415 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 STOML1Q9UBI4 398 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 GPR55Q9Y2T6 319 aaPredicted RBP12.03□□□□□ -0.48
COPS3-218ENST00000584216 RNF11Q9Y3C5 154 aa12.03□□□□□ -0.48
COPS3-218ENST00000584216 RTTNQ86VV8 2226 aa12.02□□□□□ -0.48
COPS3-218ENST00000584216 A0A087X1B8 175 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 TCRBV9S1A1TA0A576 114 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 FAM159BA6NKW6 160 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 EIF3HO15372 352 aaKnown RBP eCLIP12.02□□□□□ -0.49
COPS3-218ENST00000584216 SEC14L5O43304 696 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 KLF4O43474 513 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 CD5LO43866 347 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 PLGP00747 810 aaPredicted RBP12.02□□□□□ -0.49
COPS3-218ENST00000584216 F12P00748 615 aaPredicted RBP12.02□□□□□ -0.49
COPS3-218ENST00000584216 GSTA2P09210 222 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 MTHFD2P13995 350 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 SSTR1P30872 391 aa12.02□□□□□ -0.49
COPS3-218ENST00000584216 EMDP50402 254 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms