RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 EIF2B1Q14232 305 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 ZIC1Q15915 447 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 RAET1GQ6H3X3 334 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 SPINK14Q6IE38 97 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 MRPL38Q96DV4 380 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 DNAJA3Q96EY1 480 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 RANBP9Q96S59 729 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 ERVK-6Q9BXR3 956 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 NMNAT2Q9BZQ4 307 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 YAE1D1Q9NRH1 226 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 DCAF13Q9NV06 445 aaKnown RBP4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 RNF115Q9Y4L5 304 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 NOTCH3Q9UM47 2321 aa4.29□□□□□ -1.72
SMARCE1-219ENST00000583294 ZSCAN5CA6NGD5 496 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 EFCAB7A8K855 629 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 IMPA2O14732 288 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 PRAMEF12O95522 483 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 SLC35G4P0C7Q5 338 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 PTPN6P29350 595 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 RFTN1Q14699 578 aaPredicted RBP4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 TIMM50Q3ZCQ8 353 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 RNLSQ5VYX0 342 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 SERINC5Q86VE9 423 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 MINDY2Q8NBR6 621 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 CNNM3Q8NE01 707 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 NCLNQ969V3 563 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 CARD6Q9BX69 1037 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 MBD2Q9UBB5 411 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 P2RX2Q9UBL9 471 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 GHRLQ9UBU3 117 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 RSPH14Q9UHP6 348 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 SMAD5-AS1Q9Y6J3 95 aa4.28□□□□□ -1.72
SMARCE1-219ENST00000583294 TTC26A0AVF1 554 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 H0YL77 283 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 ALPIP09923 528 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 UMPSP11172 480 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 ASMTP46597 345 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 HTR5AP47898 357 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 MRPS6P82932 125 aaKnown RBP4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 MICAQ29983 383 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 CCDC92Q53HC0 331 aaPredicted RBP4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 DMKNQ6E0U4 476 aaPredicted RBP4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 PAQR9Q6ZVX9 377 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 MARCH9Q86YJ5 346 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 FAM71CQ8NEG0 241 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 MCHR2Q969V1 340 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 C14orf79Q96F83 325 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 ACTR8Q9H981 624 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 ZNF107Q9UII5 783 aaPredicted RBP4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 DHRS7Q9Y394 339 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 MMP24Q9Y5R2 645 aa4.27□□□□□ -1.73
SMARCE1-219ENST00000583294 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 NPIPA2E9PIF3 369 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 PHOX2AO14813 284 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 TOXO94900 526 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 THY1P04216 161 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 GSTT2P0CG29 244 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 GSTT2BP0CG30 244 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 ARF4P18085 180 aaPredicted RBP4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 ARHGDIBP52566 201 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 BPIFB3P59826 476 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 ZP4Q12836 540 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 Q1RN00 199 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 ATAD3CQ5T2N8 411 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 ZNF562Q6V9R5 426 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 Q7L0L9 218 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 ZSCAN30Q86W11 494 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 UNC5CLQ8IV45 518 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 CCDC36Q8IYA8 594 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 VN1R17PQ8TDU5 208 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 ART4Q93070 314 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 C11orf24Q96F05 449 aaPredicted RBP4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 KCNK16Q96T55 309 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 KAT8Q9H7Z6 458 aaKnown RBP4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 SLC7A10Q9NS82 523 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 IMPAD1Q9NX62 359 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 DUS2Q9NX74 493 aaKnown RBP4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 ABCD2Q9UBJ2 740 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 NAALAD2Q9Y3Q0 740 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 POGZQ7Z3K3 1410 aa4.26□□□□□ -1.73
SMARCE1-219ENST00000583294 COL2A1P02458 1487 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 E9PMD0 336 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 SGK494L7N484 410 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 CA3P07451 260 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 ANXA4P09525 319 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 RRASP10301 218 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 DNAJB1P25685 340 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 MAGEA9P43362 315 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 PEX6Q13608 980 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 RAB35Q15286 201 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 SLC39A4Q6P5W5 647 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 VITQ6UXI7 678 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 HACD2Q6Y1H2 254 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 NET1Q7Z628 596 aaPredicted RBP4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 OR52B4Q8NGK2 314 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 FNDC8Q8TC99 324 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 TADA1Q96BN2 335 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms