RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 FAM156AQ8NDB6 213 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 OR7A2PQ8NGA2 310 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 PYDC1Q8WXC3 89 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 DACT3Q96B18 629 aaPredicted RBP9.58□□□□□ -0.88
SS18-221ENST00000582448 CLIP3Q96DZ5 547 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 FAM120BQ96EK7 910 aaKnown RBP9.58□□□□□ -0.88
SS18-221ENST00000582448 SLC41A2Q96JW4 573 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 EGLN2Q96KS0 407 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 KCNC2Q96PR1 638 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 TBCDQ9BTW9 1192 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 SARGQ9BW04 601 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 ASF1BQ9NVP2 202 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 GPR83Q9NYM4 423 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 ACTR3BQ9P1U1 418 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 EPHA6Q9UF33 1036 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 ATP6V1HQ9UI12 483 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 BTNL2Q9UIR0 455 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 IGKV1-8A0A0C4DH67 115 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 A0A0J9YY10 115 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 ANKUB1A6NFN9 424 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 GABRR3A8MPY1 467 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 RNASET2O00584 256 aaKnown RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 PLPP1O14494 284 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 ACOT8O14734 319 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 SUSD5O60279 629 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 GBAP04062 536 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 IL3P08700 152 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 HOXB6P17509 224 aaKnown RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 POU3F2P20265 443 aaPredicted RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 IL10P22301 178 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 PSMA4P25789 261 aaKnown RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 ELAVL4P26378 380 aaKnown RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 HTR1EP28566 365 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 PEBP1P30086 187 aaKnown RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 BCL6P41182 706 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 GRIA3P42263 894 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 ERFP50548 548 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 PLA2G16P53816 162 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 ITGA1P56199 1179 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 MTPNP58546 118 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 MRPS22P82650 360 aaKnown RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 PRR5P85299 388 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 MS4A2Q01362 244 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 RELAQ04206 551 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 KLC1Q07866 573 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 SLC9A5Q14940 896 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 MUM1Q2TAK8 710 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 RUNDC3AQ59EK9 446 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 MTX3Q5HYI7 312 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 TOR1AIP1Q5JTV8 583 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 LRIF1Q5T3J3 769 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 ZNF425Q6IV72 752 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 POMZP3Q6PJE2 187 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 SPESP1Q6UW49 350 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 LRRC74BQ6ZQY2 392 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 ASPGQ86U10 573 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 ANKRD46Q86W74 232 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 PAQR7Q86WK9 346 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 SLC38A9Q8NBW4 561 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 CAMKVQ8NCB2 501 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 CATSPER1Q8NEC5 780 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 OR2T12Q8NG77 320 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 OR2L5Q8NG80 312 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 PNPLA2Q96AD5 504 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 COQ8BQ96D53 544 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 NSMCE2Q96MF7 247 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 CCDC115Q96NT0 180 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 FCRL4Q96PJ5 515 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 OR2A14Q96R47 310 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 NRTNQ99748 197 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 SLC7A5P2Q9GIP4 190 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 PCDHAC1Q9H158 963 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 RAD21L1Q9H4I0 556 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 SOHLH2Q9NX45 425 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 C6orf203Q9P0P8 240 aaPredicted RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 NKX1-2Q9UD57 310 aaPredicted RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 ZNF282Q9UDV7 671 aaPredicted RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 MED13Q9UHV7 2174 aa9.57□□□□□ -0.88
SS18-221ENST00000582448 RP1L1Q8IWN7 2480 aaPredicted RBP9.57□□□□□ -0.88
SS18-221ENST00000582448 SHANK1Q9Y566 2161 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 LRIT2A6NDA9 550 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 OR5K3A6NET4 321 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 WIPF3A6NGB9 483 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 ARPC2O15144 300 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 ERI3O43414 337 aaKnown RBP9.56□□□□□ -0.88
SS18-221ENST00000582448 LCMT2O60294 686 aaKnown RBP9.56□□□□□ -0.88
SS18-221ENST00000582448 GPIP06744 558 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 ZCCHC18P0CG32 403 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 UMPSP11172 480 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 LAMP1P11279 417 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 DDCP20711 480 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 MAGP20916 626 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 OTX2P32243 289 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 GCKP35557 465 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 BSGP35613 385 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 PTDSS1P48651 473 aaKnown RBP9.56□□□□□ -0.88
SS18-221ENST00000582448 ALDH9A1P49189 494 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 HSD11B2P80365 405 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 PDE7AQ13946 482 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 ZIC1Q15915 447 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms