RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	ARL13A	Q5H913	290 aa	Predicted RBP	11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	C1orf185	Q5T7R7	199 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RIPPLY2	Q5TAB7	128 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FAM180B	Q6P0A1	224 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LRIG3	Q6UXM1	1119 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PRR22	Q8IZ63	422 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NATD1	Q8N6N6	113 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	OR7G2	Q8NG99	324 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	OR6Y1	Q8NGX8	325 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZFP28	Q8NHY6	868 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RNF138	Q8WVD3	245 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	KAT2A	Q92830	837 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PPP3R2	Q96LZ3	170 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	AMDHD1	Q96NU7	426 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZIM3	Q96PE6	472 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PARD6B	Q9BYG5	372 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	REEP4	Q9H6H4	257 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FOLH1B	Q9HBA9	442 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	DDX18	Q9NVP1	670 aa	Known RBP	11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SLC17A7	Q9P2U7	560 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SPRR3	Q9UBC9	169 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EXO1	Q9UQ84	846 aa	Known RBP	11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RNF6	Q9Y252	685 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	POLR3H	Q9Y535	204 aa	Predicted RBP	11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FAM215A	Q9Y5M1	114 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NBPF19	A0A087WUL8	3843 aa		11.51	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ESPN	B1AK53	854 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LSM1	O15116	133 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TSPAN2	O60636	221 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TRAPPC6A	O75865	159 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	JUN	P05412	331 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	BPGM	P07738	259 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GLI4	P10075	376 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SDC1	P18827	310 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	IL12B	P29460	328 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SSTR2	P30874	369 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZFP36L2	P47974	494 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PSMD4	P55036	377 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NUP107	P57740	925 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CRYZ	Q08257	329 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PDE7A	Q13946	482 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZNHIT3	Q15649	155 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NNAT	Q16517	81 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	KRT71	Q3SY84	523 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FAM219B	Q5XKK7	198 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	BICRAL	Q6AI39	1079 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	VASN	Q6EMK4	673 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RTL6	Q6ICC9	239 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MCEMP1	Q8IX19	187 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ULK2	Q8IYT8	1036 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SIMC1	Q8NDZ2	872 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	OR5M9	Q8NGP3	310 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CEP70	Q8NHQ1	597 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CDC26	Q8NHZ8	85 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TWIST2	Q8WVJ9	160 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TMBIM1	Q969X1	311 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ELP4	Q96EB1	424 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	C14orf79	Q96F83	325 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GNRHR2	Q96P88	292 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PRDM14	Q9GZV8	571 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TUBB1	Q9H4B7	451 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GLIPR2	Q9H4G4	154 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	C3orf14	Q9HBI5	128 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	KCNJ16	Q9NPI9	418 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	KLRF1	Q9NZS2	232 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NTM	Q9P121	344 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ABCG2	Q9UNQ0	655 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	OR10H1	Q9Y4A9	318 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ACTL7B	Q9Y614	415 aa		11.5	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	HSPB2	A8KAH6	182 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	UPK1A	O00322	258 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TM9SF1	O15321	606 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	BIRC5	O15392	142 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RGS16	O15492	202 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PDPK1	O15530	556 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CTIF	O43310	598 aa	Known RBP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SPAG7	O75391	227 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LRAT	O95237	230 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EPPIN	O95925	133 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CHRNG	P07510	517 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LINC00032	P0C843	101 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	IGFBP2	P18065	325 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TACR1	P25103	407 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TIMP3	P35625	211 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PEX19	P40855	299 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PTGDS	P41222	190 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MC3R	P41968	323 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FRK	P42685	505 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ETV4	P43268	484 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CORO7	P57737	925 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PSG6	Q00889	435 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MLC1	Q15049	377 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CDSN	Q15517	529 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	HSPB2	Q16082	182 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SMU1	Q2TAY7	513 aa		11.49	□□□□□ -0.57

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