RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PTGER1P34995 402 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 CHI3L1P36222 383 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 KHKP50053 298 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 NRG3P56975 720 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 MLF1P58340 268 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ZNF155Q12901 538 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 LASP1Q14847 261 aaKnown RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 RGNQ15493 299 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 SPATS1Q496A3 300 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 PIGGQ5H8A4 983 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ACER2Q5QJU3 275 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 AGAP7PQ5VUJ5 663 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 HLA-DQA1Q5Y7H0 255 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 HEPHL1Q6MZM0 1159 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 TMEM81Q6P7N7 255 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 DNAJC14Q6Y2X3 702 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 METTL25Q8N6Q8 603 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 POU5F2Q8N7G0 328 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 SIMC1Q8NDZ2 872 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 CHDHQ8NE62 594 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 OR5AK3PQ8NH89 298 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 BRIX1Q8TDN6 353 aaKnown RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 PMM1Q92871 262 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 NSL1Q96IY1 281 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 AGAP4Q96P64 663 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 SMAD5Q99717 465 aaKnown RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 CPPED1Q9BRF8 314 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ITPAQ9BY32 194 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ADNPQ9H2P0 1102 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ANKRA2Q9H9E1 313 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ARL8BQ9NVJ2 186 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 GPR83Q9NYM4 423 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 SLAMF8Q9P0V8 285 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ABI3Q9P2A4 366 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 ABCD2Q9UBJ2 740 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 MRTO4Q9UKD2 239 aaKnown RBP9.62□□□□□ -0.87
CCDC47-203ENST00000580986 DTX4Q9Y2E6 619 aa9.62□□□□□ -0.87
CCDC47-203ENST00000580986 PRKNO60260 465 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 DNAJA2O60884 412 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ATP5HO75947 161 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 DNAJB5O75953 348 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 UNC5CO95185 931 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NADKO95544 446 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 GSNP06396 782 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 CELA2AP08217 269 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ALOX5P09917 674 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 T-ENOLP0DO92 83 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ACP2P11117 423 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 MATN1P21941 496 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 SLC6A2P23975 617 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 PIGAP37287 484 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NUDT2P50583 147 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 PRKAG1P54619 331 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 PSMD4P55036 377 aaKnown RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 CXADRP78310 365 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 RHDQ02161 417 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 RBBP4Q09028 425 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 MFAP5Q13361 173 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ART3Q13508 389 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 GTDC1Q4AE62 458 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 LCE2AQ5TA79 106 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ABHD17BQ5VST6 288 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 PRAMEF8Q5VWM4 474 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 PRAMEF7Q5VXH5 474 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NANOGP8Q6NSW7 305 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 TCTN3Q6NUS6 607 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 OPN5Q6U736 354 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 IGFL3Q6UXB1 125 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ISLR2Q6UXK2 745 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NPSR1Q6W5P4 371 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 SZRD1Q7Z422 152 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NET1Q7Z628 596 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 SERPINA11Q86U17 422 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 PGAM4Q8N0Y7 254 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ARHGAP24Q8N264 748 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 SLC16A11Q8NCK7 471 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 FAM110BQ8TC76 370 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ADAMTS15Q8TE58 950 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 SLC35A4Q96G79 324 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 MAGED4Q96JG8 741 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 GAL3ST4Q96RP7 486 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 RASL10BQ96S79 203 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 SECISBP2Q96T21 854 aaKnown RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NPAS2Q99743 824 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 BTBD2Q9BX70 525 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NXF5Q9H1B4 397 aaKnown RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 SERHL2Q9H4I8 314 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 TMEM38AQ9H6F2 299 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 ZNF552Q9H707 407 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 KAT8Q9H7Z6 458 aaKnown RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NANOGQ9H9S0 305 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 POLE3Q9NRF9 147 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 EXD2Q9NVH0 621 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.61□□□□□ -0.87
CCDC47-203ENST00000580986 LIPT1Q9Y234 373 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 MED13Q9UHV7 2174 aa9.61□□□□□ -0.87
CCDC47-203ENST00000580986 OR6C70A6NIJ9 312 aa9.6□□□□□ -0.87
CCDC47-203ENST00000580986 MKRN2OSH3BPM6 223 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms