RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 VPS4BO75351 444 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 NME6O75414 186 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CRCPO75575 148 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 C1QL1O75973 258 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MYO1DO94832 1006 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 LRATO95237 230 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CHEK2O96017 543 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 PLATP00750 562 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CT45A8P0DMV1 189 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CT45A9P0DMV2 189 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 PORP16435 677 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CSNK2A2P19784 350 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CAPN3P20807 821 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 PRPS1L1P21108 318 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 FEN1P39748 380 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CDKN2CP42773 168 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 ASMTP46597 345 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MAN2A2P49641 1150 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 ATP4BP51164 291 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 XKP51811 444 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 DGKQP52824 942 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 POLE2P56282 527 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 OR4D2P58180 307 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 HBA1P69905 142 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 RNF4P78317 190 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MRPS35P82673 323 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 C2orf80Q0P641 193 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 FUT5Q11128 374 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 AIMP2Q13155 320 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC13A2Q13183 592 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SERTAD2Q14140 314 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MYBPC3Q14896 1274 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 HEPACAMQ14CZ8 416 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MAPK11Q15759 364 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 IMPG1Q17R60 797 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 DEFB109BQ30KR1 87 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 TRMT12Q53H54 448 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 HSP90B2PQ58FF3 399 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CT45A2Q5DJT8 189 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SPANXN4Q5MJ08 99 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 BROXQ5VW32 411 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 AP1ARQ63HQ0 302 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 B3GNTL1Q67FW5 361 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 OR4F3Q6IEY1 312 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 BORAQ6PGQ7 559 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 IGFL3Q6UXB1 125 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 NPSR1Q6W5P4 371 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 C16orf47Q6ZP98 133 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF551Q7Z340 670 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SPATA19Q7Z5L4 167 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CRLF3Q8IUI8 442 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CLECL1Q8IZS7 167 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 LGI4Q8N135 537 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 C10orf111Q8N326 155 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 LRRC25Q8N386 305 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 TMEM132CQ8N3T6 1108 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CPSF7Q8N684 471 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 RBMXL3Q8N7X1 1067 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 Q8NA96 180 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 FNDC5Q8NAU1 212 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MORN4Q8NDC4 146 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MDS2Q8NDY4 140 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 OR4K14Q8NGD5 310 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 OR1N1Q8NGS0 311 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 OR9A2Q8NGT5 310 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 OR8K3Q8NH51 312 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 OR14A16Q8NHC5 309 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CEP70Q8NHQ1 597 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 GOT1L1Q8NHS2 421 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 BRIX1Q8TDN6 353 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 EXTL1Q92935 676 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 GFM2Q969S9 779 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 NCLNQ969V3 563 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 EXOSC8Q96B26 276 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 KLHL29Q96CT2 875 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 ELP4Q96EB1 424 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 THOC1Q96FV9 657 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 WBP1Q96G27 269 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 VSTM2LQ96N03 204 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CATSPER2Q96P56 530 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 IP6K3Q96PC2 410 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 LMF1Q96S06 567 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SIKE1Q9BRV8 207 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CENPKQ9BS16 269 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 TMEM120AQ9BXJ8 343 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 RSPO3Q9BXY4 272 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 ING2Q9H160 280 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MYLK2Q9H1R3 596 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 CXorf36Q9H7Y0 433 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 PROK2Q9HC23 129 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SH2D2AQ9NP31 389 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 TCF7L2Q9NQB0 619 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SAR1AQ9NR31 198 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 ACSS1Q9NUB1 689 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 NMRK1Q9NWW6 199 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC25A37Q9NYZ2 338 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 ZIM2Q9NZV7 527 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 KLHL14Q9P2G3 628 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 TUBD1Q9UJT1 453 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 UTS2RQ9UKP6 389 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms