RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 ALOX12BO75342 701 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 SERPINA1P01009 418 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 HBQ1P09105 142 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 IL1RNP18510 177 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 PEX2P28328 305 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 PPP2R1BP30154 601 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 FRKP42685 505 aaPredicted RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 AVPR1BP47901 424 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CCT3P49368 545 aaKnown RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 TP53BP2Q13625 1128 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CRB2Q5IJ48 1285 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 WLSQ5T9L3 541 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 GARNL3Q5VVW2 1013 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 LPCAT4Q643R3 524 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 TMEM64Q6YI46 380 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 Q6ZS92 163 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 MMP21Q8N119 569 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 PAPD5Q8NDF8 572 aaKnown RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 OR4K14Q8NGD5 310 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 OR5AK3PQ8NH89 298 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 SFXN5Q8TD22 340 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 GRHL3Q8TE85 626 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 LZICQ8WZA0 190 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 SLCO4A1Q96BD0 722 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 NEURL3Q96EH8 262 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CENPNQ96H22 339 aaPredicted RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 PYURFQ96I23 114 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 IP6K3Q96PC2 410 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 MAPKAP1Q9BPZ7 522 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 C9orf16Q9BUW7 83 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CHID1Q9BWS9 393 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CHRNA10Q9GZZ6 450 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 SPRTNQ9H040 489 aaPredicted RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 TMEM38AQ9H6F2 299 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 RUBCNLQ9H714 662 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CXorf36Q9H7Y0 433 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CLK4Q9HAZ1 481 aaKnown RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 ATP13A2Q9NQ11 1180 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CNOT11Q9UKZ1 510 aaKnown RBP9.48□□□□□ -0.89
SS18-207ENST00000577636 USP22Q9UPT9 525 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 NAALAD2Q9Y3Q0 740 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 V9GYQ6 96 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CSMD1Q96PZ7 3565 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CROCCQ5TZA2 2017 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 CRYBG3Q68DQ2 2970 aa9.48□□□□□ -0.89
SS18-207ENST00000577636 MYO1GB0I1T2 1018 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 H0YJX3 145 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 GALR3O60755 368 aaPredicted RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 KLF7O75840 302 aaPredicted RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 PDE9AO76083 593 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 IGHEP01854 428 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 FHP07954 510 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 SMIM10L1P0DMW3 83 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 BMP2P12643 396 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 ETFAP13804 333 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 ATP6V1C1P21283 382 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 KDELR2P33947 212 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 KHKP50053 298 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 GZMMP51124 257 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 ARHGDIAP52565 204 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 LIM2P55344 173 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 DSTNP60981 165 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 DCDP81605 110 aaKnown RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 SCARB2Q14108 478 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 GRM7Q14831 915 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 ATP6AP1Q15904 470 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 MPEG1Q2M385 716 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 DEFB110Q30KQ9 67 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 FAM214AQ32MH5 1076 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 CMPK2Q5EBM0 449 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 SAXO2Q658L1 398 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 IGFL3Q6UXB1 125 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 ZNF551Q7Z340 670 aaPredicted RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 C6orf120Q7Z4R8 191 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 PATL1Q86TB9 770 aaKnown RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 RNF130Q86XS8 419 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 PDSS2Q86YH6 399 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 TMEM151BQ8IW70 566 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 ZC3H7AQ8IWR0 971 aaKnown RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 LRRC25Q8N386 305 aaPredicted RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 DNAJC22Q8N4W6 341 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 METTL25Q8N6Q8 603 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 PACRGLQ8N7B6 248 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 AMER3Q8N944 861 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 ANKFN1Q8N957 763 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 PSMA8Q8TAA3 256 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 TANKQ92844 425 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 SMIM10Q96HG1 83 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 SLC35G5Q96KT7 338 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 AMDHD1Q96NU7 426 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 AICDAQ9GZX7 198 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 SEMA6AQ9H2E6 1030 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 GLIPR2Q9H4G4 154 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 ZCCHC3Q9NUD5 404 aaKnown RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 DHCR7Q9UBM7 475 aaKnown RBP9.47□□□□□ -0.89
SS18-207ENST00000577636 DAPP1Q9UN19 280 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 LRCH1Q9Y2L9 728 aa9.47□□□□□ -0.89
SS18-207ENST00000577636 PCSK5Q92824 1860 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms